Brassica napus (rape): 106414845
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Entry
106414845 CDS
T04128
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106414845
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106414845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
TPR_Trm732_C
HEAT_2
ResIII
TPR_TNPO3_IPO13_3rd
HEAT_GCN1
UTP20
Motif
Other DBs
NCBI-GeneID:
106414845
NCBI-ProteinID:
XP_048620584
LinkDB
All DBs
Position
C8:36889438..36901792
Genome browser
AA seq
2048 aa
AA seq
DB search
MAQQQQSSRLSRLLTLLDTGSTQTTRLTAARQIGDIAKSHPQDLCSLLRKVLHYLRSRKW
DTRVAAAHAIGAIVLNVKHTSLSELLNSLATKLGEAGLSGNVDEVVASGNLQSKLLENAP
FRSFEMNKVLEFGALLASGGQEYDILNDNSKNPRDRMARQKKNLRRRLGLDMCEQFMDVN
EMIGDEDLIEQKSNVHANGVGNRLYANYSPHHIQQFVSRMVPRVAHRRPSARELNLLKRK
AKISSKDQAKGNCEGADVEMSSSHASTSKRTLSDSMDSNKANIGNEDDMEPDADGRWPFH
SFVEQLILDMFDPAWEIRHGSVMALREILMLHGGSAGVSTAEFSSDNGFDLNEDLTKVTR
EKEIDLNMQFSVNELEPLRKRPKIEDPSKSFVGNTVLEPMVSDYENSVKDEEVESLLPPV
KVNGQVNFISTKEEPESSIDGSSCQSDRNHVAEVSNHVEDKSFVEKPLLPNKNQEENIEV
LDLVKQARHSWIKNFEFLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKY
MSPSLIYETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLQDLLGHILPACKAGLED
SDDDVRAVAADALIPAAAAIVSLRGQTLLSIVMLLWDILLELDDLSPSTSSVMNLLAEIY
SQDDMTVVMHEELSVGEGQKVDLNEMAHVESVRERRDVRESPYALSGLAPRLWPFTRHDI
TSVRFSAIRTLERLLEAGCRKNISEQSKSSFWPSSILGDTLRIVFQNLLLESTEEILECS
ERVWRLLVQCPVEDLEEAAKSYMASWIELAATPYGSTLDATKMFWPVAPPRMSHFKAAAK
MKAVQLENEASSTLGFDYARSFASLGKNEDASARSTKIIVGSDMEMSVTRTRVVTASALG
ILASRLSDRSMQFVVDPLSSTLTSLSGVQRQVASVVLISWFREIKCKVPSPSDGSGSLPG
FPTPLKKWMLDLLACSDPAFPTKDILLPYAELSRTYTKMRNEASQLLHTVETYHCFDKLL
STTKLNADSLSADETIEFASTLALWNKDSAEKESLEKQVFEDVESSRQQLLSTAGYLKCV
QNNLHITVTSLIAAAVVWMSEFPSRLNPIILPLMASIKREQEQILQQKAAEALAELIAYC
VDRKPSPNDKLIKNICSLTCMDPSETPQASIIRSIDIVDDLDFLSSRSNAGKQKSKAVLA
GGEDRSKVEGFITRRGAELALKHLSVKFGGSLFDKLPKLWECLTEVLIPVTPEDQQNFDL
KIESVSDPQVLINNIQVVRSVAPVMEETLKPRLLSLLPCIFKCVRHSHVAVRLAASRCVM
TMAKSMTTNVMAAVVENAIPMLGDLTCVNARQGAGMLIGLLVQGLGVELVPYSPLLVVPL
LRCMSDVDSSVRQSVTRSFAALVPMLPLARGVPPPVGLSQDLSSNAEDAKFLEQLLDNSH
IDDYKLCTELKVTLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAER
RGVTDEPDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLRELFKNHN
VIITSYDVVRKDADYLTQFSWNYCILDEGHIIKNAKSKITSAVKQLKAQHRLILSGTPIQ
NNIIELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVM
PFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSHAKQEISTIIKVDGSADSS
NVEVAPTKASTHVFQALQYLLKLCSHPLLVLGEKVTEPVASDLAAMINGCSDIITELHKV
QHSPKLVALQEILEECGIGSEASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKS
VTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTIVFMEHDWNPM
RDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQRFKVSVANTVINAENASMKTMNT
DQLLDLFASAETSKKGGASSKKGAEDNDQTAGTGKGIKAILGNLEELWDQSQYTEEYNLN
QFLAKLNG
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaacaacaatcttcgcgactcagtcgtctccttacattgttggacactggt
tcaacacaaactactcggttaactgcagccaggcagatcggagatattgcaaagtctcat
cctcaggacttgtgctctcttttgagaaaggttttgcattacctccgtagtagaaagtgg
gatacgagggttgctgctgctcatgctattggtgccattgtcctgaatgtgaagcatact
tcattgagtgaactcttaaattctttagcaacaaagttgggcgaagccgggttatctggt
aatgtagatgaagtggtggcttcaggcaatctacagtccaaacttctagaaaatgctccc
ttcagaagcttcgagatgaataaggttttagagtttggcgctttgttggcatctggtgga
caggagtacgacattttgaatgacaattccaaaaatccaagggaccgaatggctcgtcag
aaaaagaatctccggcgacgtctaggtttggacatgtgcgagcagtttatggatgtcaat
gaaatgattggagatgaggatctgattgagcagaagtccaatgttcacgcgaatggagtt
ggaaacagattatacgcaaactattctccacatcacattcaacaatttgtttcaagaatg
gttcctcgtgtcgctcacaggaggccaagcgcaagggaattaaatctactaaaacgtaaa
gcaaaaataagctcaaaagatcaagccaaaggtaactgcgaaggagcagatgttgagatg
tcatcatctcatgcctcaacctcaaaaagaacgttgtctgactcaatggactctaacaag
gcaaacattggtaacgaagatgatatggagcctgatgcggatggaagatggccgttccac
agctttgttgagcaacttattcttgacatgtttgaccctgcatgggagatccgtcatggc
agtgtaatggctctgagagaaatattaatgcttcatggtggttctgcgggagtgtcaaca
gcagagtttagctcggataatggttttgatttgaacgaagatttgactaaagtaacacga
gagaaagaaatcgacttgaatatgcaattttcagtaaatgagctggagccacttcgcaaa
agacctaagattgaggatccatcaaaatcatttgttggtaacacggttttggaacctatg
gtgagtgactatgaaaatagtgttaaagatgaagaagttgagtctttactgccaccagtg
aaggtcaatggtcaagttaactttatttctaccaaggaggaacctgaatcttctatcgat
ggctcatcatgtcagtctgatagaaatcatgttgcagaggttagcaatcacgttgaagat
aagagttttgttgagaaacccctcctacctaacaagaatcaggaagaaaatattgaagtg
ttggatttggttaaacaagctaggcattcttggatcaaaaattttgaatttctccaggat
tgcaccattcgtttcttatgtgtgctttcacttgaccgttttggggattatatttctgat
caggttgttgctcctgtgcgggaagcttgtgcccaagcacttggtgctactttcaaatac
atgagtccctcgttgatttatgagacattaaatatcttgcttcagatgcagcgccggcct
gaatgggaaattcgtcatggaagtcttttgggcatcaagtacttggttgctgtacgacag
gaaatgctccaagatttacttggccatattcttccggcgtgtaaagcagggctggaggat
tctgatgacgatgttcgagcggttgccgcggatgctcttataccggcagcagccgctatt
gtttctttgagaggacagacgttactttccattgtcatgttactgtgggatatcttgctt
gagttggatgacttaagtccatccactagcagtgttatgaacctcctggcagagatctat
tctcaagatgatatgacagtggtgatgcatgaagaattatcagtgggagaaggacaaaaa
gttgatctcaatgaaatggctcacgtcgagagtgttagagaaagaagagatgttagggaa
agcccttatgcgttatctggtttagcccctaggctgtggccatttacgagacacgacatc
acttcagttcgattttctgctattcgaactctggagcgactacttgaagctggatgcaga
aagaacatttctgagcagtccaaaagttctttctggccatcttctattttaggggatacc
ctaagaatcgtctttcagaatcttttgcttgaatcaaccgaggagattctggagtgttcg
gaaagagtgtggaggcttttagttcagtgcccagtggaagatttggaagaagctgcaaaa
tcatacatggcttcgtggatagaacttgcagctactccttatggctcaacattggatgct
acaaaaatgttttggccagtagctccccctcgtatgagtcatttcaaagctgctgctaag
atgaaagctgtccaacttgagaatgaagcttccagcactctgggatttgattatgcaagg
agttttgcttcccttggaaaaaatgaagatgcttctgccaggtccactaaaattatcgtt
ggctctgatatggagatgtcagtgactcgcacccgggtagttacagcatctgcgttaggt
attcttgcatcccgattgagcgatcgttcaatgcagtttgtggtagatccactgagtagt
actcttacttccttgtccggtgtacagcgccaggttgcgtcggttgtgcttatctcttgg
ttcagagaaattaaatgcaaggtcccttccccttctgatggaagtggaagtttgcctggt
tttcctactcctcttaaaaaatggatgctagatttgttagcttgctcagaccctgcattc
cccactaaagatatacttcttccttatgctgagctctcaagaacatacactaaaatgagg
aacgaagcttctcagttgttgcatacagtcgaaacctaccattgttttgataagttatta
tcgacgactaaactcaatgcggatagcttgagtgctgatgagacaattgaatttgcgtca
acattagcattgtggaataaagacagtgctgaaaaggaatccttagaaaagcaagttttt
gaagatgtggagtcatctaggcaacagctactaagtactgctggctatttaaaatgtgtc
cagaataatttacatatcacagtcacctctctgatcgctgctgcggttgtttggatgtca
gaatttccctctagacttaatccaataatcttgccgctgatggcttcaattaaaagagag
caggaacaaatactacaacagaaagctgctgaggctcttgcagaacttattgcgtactgc
gtagatcggaagcctagcccgaatgacaagttaatcaagaatatttgtagcttgacgtgc
atggatcctagcgaaacacctcaagctagtatcattaggtctatagatattgttgatgat
ctggacttcctgtcctcgcgaagtaacgcaggaaaacagaagtcaaaagcagtgttggct
ggtggcgaagacaggtctaaggttgagggttttatcaccaggagaggagctgaacttgca
ttgaagcatttaagcgtgaaatttggtggttccttgtttgacaagctccctaaattgtgg
gagtgcctcactgaggttcttattcctgtaactcctgaagatcaacagaactttgacctt
aaaatagaatctgtctctgatccacaggtcttgataaacaacattcaggttgtacgttcc
gtagcaccagtgatggaagaaactctgaaacctaggttacttagtctcttgccttgcatt
ttcaaatgcgttcgccattcccatgtggctgttagattggctgcttctagatgtgttatg
acaatggctaaatcaatgacaacaaatgtcatggcagcagtagtggaaaatgctattccg
atgttgggagatttgacatgcgtaaatgctagacaaggcgcaggaatgcttattggtttg
cttgttcaagggctgggtgtagaactggttccgtattctcctttattggttgttcccctc
ctgagatgcatgagtgatgttgacagttctgtcaggcagagcgtgacacgtagctttgct
gcccttgtacctatgcttccgttagcacgtggggttccccctcctgtagggttgagccaa
gatctatccagcaacgcagaggacgccaaatttttggagcagctacttgacaactcccat
atagatgattacaagctttgcactgaattaaaagttacactgagaaggtatcaacaggaa
ggaatcaattggttaggattcttgaaacgttttaagctccatggaattctctgcgacgat
atggggcttggtaagacgcttcaagcatctgcaattgtggcatctgatgcagcagagcgt
cgtggcgtaacagatgaaccagatgtttttccatctataattgtttgcccttcaacacta
gttggccactgggcgtttgaaattgagaagtatatcgacctttctctgctaagcgtgttg
cagtatgttggctctgcccaagaccgcgtttctctccgtgagctgttcaagaaccacaat
gtcattatcacatcttatgatgtggtccgcaaggatgctgattatctgacacagttctca
tggaactattgtattctggatgagggccacattattaagaatgcgaaatctaaaattact
tcagcagtgaaacagttgaaagcccaacaccgacttatcctcagtggaacgccaatacag
aataatatcatcgagctgtggtccctttttgactttttaatgcctggatttcttggaaca
gagagacagtttcaagcatcttatggaaaaccgttgctagctgctagagatcctaaatgc
tctgccaaggatgctgaagcgggtgtactggcaatggaagcactccataagcaagttatg
ccattcttattgcggcgtacgaaagaggaagtcctctctgacctgccagaaaaaatcata
caggacagatactgtgaccttagtcctgtccagttgaagctttatgagcagttttctggt
tcgcatgctaagcaagaaatatctactatcataaaagttgatggatcagcagattcaagc
aatgttgaagtcgcgccaacaaaagcatccacacacgttttccaggcgctgcagtacctg
cttaaactctgcagtcatccgcttcttgttcttggcgaaaaggttacagagccggtggct
tctgatttagcagcaatgataaatggatgttcagacattatcactgagcttcataaagtt
caacactcgccaaagcttgttgcccttcaagaaattttagaagaatgtggtataggttct
gaagcgtctagttcagatggaactctaagtgtaggccagcatagagttctgatatttgca
cagcacaaagctttactggacattattgaaaaagacttgtttcaagcccacatgaaaagc
gtcacatatatgcgactggatggttcggttgtacccgagaaaaggtttgagattgtgaag
gcttttaattcagatcccacaattgatgttctacttctgacaacacatgttggtggactt
ggattgaacctgacctctgctgacacgattgtgtttatggagcatgattggaatcctatg
cgtgatcatcaggcgatggatagagcgcatagattgggacagaagagagttgtaaatgta
caccgtctcataatgcgtggcacactcgaagagaaagtgatgagtctccaaagattcaaa
gtgtcggttgccaatacggtgatcaatgctgagaatgctagtatgaagacaatgaacact
gatcagttgctagacttatttgcttcagctgaaacttcgaaaaagggtggtgcgtcttcg
aagaagggagcagaggataatgatcagactgctggaactgggaaaggaatcaaagcaatt
ctgggtaacttggaggaactgtgggatcaatcacagtacacggaagagtacaatcttaac
caattcttagctaagctaaacgggtaa
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integrated database retrieval system
