Brassica napus (rape): 106414911
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Entry
106414911 CDS
T04128
Name
(RefSeq) cysteine desulfurase 1, chloroplastic
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
bna
Brassica napus (rape)
Pathway
bna00450
Selenocompound metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
106414911
Enzymes [BR:
bna01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
106414911
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
106414911
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
106414911
NCBI-ProteinID:
XP_013710946
UniProt:
A0A816KX39
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Position
C5:complement(3347711..3350391)
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AA seq
463 aa
AA seq
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MEGVAMKLPSFKSLAPTAISVASTFSIRRSFSVARRSSSLSATITADSEPVSLGHRARKD
FRILHQEVNGSKLVYLDSAATSQKPASVLEALQNYYEFYNSNVHRGIHYLSAKATDEFEL
ARKKVARFINASDSREIVFTRNATEAINLVAYSWGLSNLKPGDEVILTVAEHHSCIVPWQ
IVSQKTGAVLKFVTLNEDEVPDIDMLREMISEKTKLVAVHHVSNVLASSLPIEEIVVWAH
DVGAKVLVDACQSVPHMVVDVQKLNADFLVASSHKMCGPTGIGFLYGKSDLLLAMPPFLG
GGEMISDVFLDHSTYAEPPSRFEAGTPAIGEAIALGAACDYLSDIGMPKIHEYEVELAKY
LYEKLASVPDVRIYGPRPSESVQRAALCSFNVEGLHPTDLATFLDQQHGVAIRSGHHCAQ
PLHRYLGVNASARASLYFYNTKEDVDSFIVALADTASFFNSFK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtggctatgaaactcccctctttcaaatccctagcccccaccgccatctcc
gtcgcctctaccttctccatacgacggagcttctccgtcgctcgccgctcctcttcgcta
tcggccaccatcaccgccgattcagagcccgtctctctcggccatcgcgctcgtaaagac
tttcgaattctacaccaggaagtgaatggctctaagcttgtgtacttggacagtgctgcg
acttctcagaagcctgcttctgtattggaagctttgcagaattactatgagttctataat
tcaaacgttcatagaggaatccactacttaagtgccaaggctacagatgaatttgagttg
gctaggaagaaggtagctcgtttcatcaatgcttccgatagtagagagattgttttcacg
aggaacgctactgaagccatcaatcttgttgcttattcttggggtctttctaacctcaaa
ccaggagacgaggttatacttacagtggccgaacatcatagctgcattgtcccttggcaa
attgtatctcaaaagactggagctgttctgaagtttgtgactttgaatgaagatgaagtt
ccggacatagacatgttgagagaaatgatttctgaaaagacgaaactcgtggctgttcat
cacgtatcaaatgttcttgcatcttctcttcctattgaagagattgtggtctgggcgcat
gatgttggagcgaaggttcttgtggatgcttgtcaaagtgttccacacatggtggttgat
gtacagaagctaaatgctgatttcttagttgcgtcttctcacaagatgtgtggacctaca
ggcattggtttcttatatggtaagagtgatcttctacttgccatgcctccattcttaggt
ggcggagaaatgatctcagatgtatttctagatcattcgacttatgcggaacctccatcg
agatttgaagctggaacacctgcaattggtgaagcaattgcccttggagcagcctgtgat
tacttgtcagatattggcatgccgaaaatccatgaatatgaggtcgagcttgctaagtac
ctgtacgagaaactggcttcagtgcctgatgtccggatatacggcccaaggccttctgaa
agtgttcaaagggcagctctttgttccttcaatgtggagggactgcacccaactgatttg
gcaaccttccttgatcaacagcatggagttgcgataaggtcaggacaccactgcgctcag
ccactccaccggtatcttggagtgaatgcaagtgcacgcgccagcctctacttttacaac
acgaaggaagacgttgactccttcatcgttgcacttgcagatactgcgagcttcttcaat
tctttcaaatag
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