Brassica napus (rape): 106414978
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Entry
106414978 CDS
T04128
Name
(RefSeq) CSC1-like protein At3g54510 isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106414978
Transporters [BR:
bna02000
]
Other transporters
Pores ion channels [TC:
1
]
106414978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
106414978
NCBI-ProteinID:
XP_013711021
LinkDB
All DBs
Position
C8:36990610..36994408
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AA seq
705 aa
AA seq
DB search
MTPESLIASASINIGLAILALWLFSVLKKQPRNAVIYYARLLSDRHRADLPIHSSFSLPR
FVPSVAWIPRAFRVPEEDILRRHGLDALVLMRLFKFGTRFFMLCSLLGVALLLPVDYYSE
SDLPTRKEYSMDAFTISNITRGSNKLWVHFSCLWFISLYALFLLHKEYKEILVKRLQQMK
ELSHHADQFTVLVRQVPVCPEHNTLSCGVDHFFSKHHPFSYHSHQMLYDGRDIEYLLGKQ
KKLKKELEENRDTEEHKHISISEEKFREFAHKVSHLQSETMLREKELPVAFVTFKSRRSA
ALVAQTQQHSNPLELITEMAPEPRDVSWRNLAIPQQILPLNKIGVILAAAALTIFFAIPV
TAVQGIAKYEKLKKWFPPAMAVEFIPGLSSVVTGYLPSAILKGFMYIVPYAMLGMAYLGG
SISKSKEEIKACNMVFYFLMGNVFFLSVISGSLLDEIGEYFTHPRDIPSHLAAAVSAQGE
FFMTYILTDGLSGFSLEILQLGLITFDIIRSCTYGRAKENNTYLFSFPYFRVIPTVSLSI
LIGMIYAVVAPLMLPFLVGYFCLGYIVYFNQMEDVYEMTYDTCGCFWPIIHHYIFVSIIL
MQVTMVGLFGLKSKPSAAIATVPLILITIAYNEYCKIRFLPSFKHFPIQTAVEIDEVDEK
NGETEAHYVDAATAYNRHQPCLERVTLSAEPATNLNQPLLGTGSI
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagagagcttgatagcgtcggcgtcgatcaacataggactcgccatcctcgca
ctctggctcttctccgtgctgaagaagcagccacgcaacgccgtcatctactacgctcgc
ctcctctccgatcgccaccgcgctgatcttcctatccactcctccttctccctccctcgc
ttcgttccttccgtagcctggatcccacgagcctttcgtgtccccgaggaagacatcctc
cgccgccatggcctcgacgctctcgtcctcatgaggctcttcaaattcggaaccagattc
ttcatgttgtgttcgttacttggagtagcactgcttcttcctgttgattattacagtgag
tcagatttgcctacgagaaaggagtactcgatggatgctttcactatatcaaatatcact
agaggttctaacaagttgtgggtgcatttctcatgcttgtggttcatatcattgtatgcg
ttgtttttgttgcataaggaatacaaagagattcttgtgaaaaggcttcagcaaatgaaa
gaactaagccatcatgctgaccagttcactgttcttgtccggcaagttccagtctgccct
gagcataacactcttagctgcggtgttgaccactttttctctaaacatcatcctttcagt
tatcattcgcatcagatgttgtacgatgggagagatattgaataccttttggggaagcag
aagaagcttaagaaagagctagaagaaaatagagacacagaagaacataaacatatatca
atttccgaagaaaagtttcgagaatttgctcataaggtttcccaccttcaaagtgaaact
atgctcagagagaaggagttacctgttgcgtttgtcaccttcaaatcacgaagaagtgct
gcactggtagctcaaacacagcagcactcaaaccctctagaactgatcactgaaatggct
cctgaaccaagagatgtgtcatggagaaatcttgctatccctcaacagatattacctctc
aacaaaatcggagtcatccttgcagcagcagcacttacaattttctttgctattccagtc
acagctgtccaggggatagcaaagtatgagaagcttaagaaatggtttcctccagccatg
gccgttgaattcataccagggctcagctcggttgtgacagggtacctcccaagcgcaata
ctcaaaggtttcatgtacattgtcccctatgctatgcttggaatggcttatctcggcggt
tctatctccaagagcaaagaggagataaaagcttgcaatatggtcttttattttctaatg
gggaatgttttcttcttgagtgtcatatctggttcattactagatgaaattggtgaatac
ttcactcatcctagagacattcctagtcaccttgctgctgctgtttcagcccagggagag
ttttttatgacatacatcttgacagatgggctgtctggattctctttggagattcttcaa
ctggggctgataacatttgatatcataagatcatgcacttacggaagagcaaaagagaac
aacacttatctcttttcgtttccatattttagggttatccccacagtgtccttatcgata
ttgattggtatgatatatgctgtggtagcaccattgatgctacctttcctggttggctat
ttttgccttggatatattgtctacttcaaccagatggaagatgtgtacgagatgacatat
gatacttgtggttgcttctggccaatcattcatcactatatctttgtatcaattatactt
atgcaagtgaccatggtgggtctctttgggctaaagtcaaagccatctgcagctatagct
actgtacctctcatattgatcactatagcttacaacgagtactgcaagatccgcttcctc
ccatcattcaaacatttcccaatacagacggcagttgaaatagatgaagtagatgaaaag
aacggggagactgaagcacattatgttgatgctgcaacagcgtataaccggcatcaacct
tgcttagagcgtgtaactttatcagcggaaccagcaacgaacttgaaccaaccgttgctt
gggaccggctcaatttga
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