Brassica napus (rape): 106414998
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Entry
106414998 CDS
T04128
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
bna
Brassica napus (rape)
Pathway
bna00500
Starch and sucrose metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
106414998
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
106414998
Enzymes [BR:
bna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
106414998
Glycosyltransferases [BR:
bna01003
]
Polysaccharide
Storage polysaccharide
106414998
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Ig_PIFI
Glyco_trans_1_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
106414998
NCBI-ProteinID:
XP_013711042
UniProt:
A0A078H187
LinkDB
All DBs
Position
C8:26843294..26848565
Genome browser
AA seq
1072 aa
AA seq
DB search
MEVCWQIQTPTSLGPGFQQKGRLKINTFIGFLPRPISSLASLESQYNSNGFLHQITATAD
FSRKKQGRMSASGPKSSAPRGFGRRTTVGSAQKRTQKKNDEKDSNATSTVTNDGLGVSKL
PEAKANVQKQGSPVIGESIVLEDEALVEQKLKAERESLRKKEIESLAEEALARGDRMFVY
PLVAKPDEDIKVFLNKTLSTLSSEPDVLIMGAFNDWRWKSFTRRLEKTKELHGDWLSCLL
HIPKEAYKMDFVFFNGQSVYDNNDSKDFCVDVKGGMDKVEFENFLLEEKWREQEKLAKEE
AERKRQEEEKRRNEARKAAIEADREQAKVETQKRREMMLQPALQKAVVSSESVWYIEPKD
FKGGDKVKIYYNKSSGPLAYAKEVWIHGGFNNWIDGLSIIEKLKADSKSEDWWFAEVIVP
VNALVIDWVFADGPPKEAFLYDNNSHQDFHELVPLRTPEELYWSEEESLMFRKLQEERRL
KEEAMRVKMETTARLKAETKERTLKKFLLSQKDVVYTEPLEIQAGRSVTVFYNPSNTVLN
GKPEIWFRGSFNRWTHRLGPLPPQKMEAADDGSSHMKTSAKVPLDAYMMDFVFSEKEDGG
VFDNRYGLDYHLPVVGGIAKEPPLHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHNV
DIIFPKYDCIKYNLVKDLQFNRSYHWGDTEIKVWHGKVEGVSVYFLDPQNGLFQRGCVYG
CADDAGRFGFFCHAALEFLLKGGFHPDILHCHDWSSAPVSWLFKDHYTHYGLIKTRVVFT
IHNLEFGASAIGKAMTFSDKATTVSRTYAKEVAGNSVISPHLYKFHGIVNGIDPDIWDPY
NDNFIPVPYTSENVVEGKRAAKEELQNRLGLKRADLPLVGIITRLTHQKGIHLIKHAIRR
TLERNGQVVLLGSAPDPRIQNDFVNLANQLHSTHGDRARLVLTYDEPLSHLIYAGADFIL
VPSIFEPCGLTQLIAMRYGAVPVVRKTGGLYDTVFDVDHDKERAQAQVLEPNGFSFDGAD
APGVDYALNRAISAWYDGREWFNSLCKTVMEQDWSWNRPALEYIELYHSARK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtgttggcagattcagacacctacgagtctcggaccgggtttccagcaaaag
ggtcggctcaaaatcaatacttttattggttttcttcctcgccccatttctagtcttgct
tcgttggaaagccaatacaactcaaatgggtttctacatcagatcacagcaactgcagat
ttctcaaggaagaagcaaggaagaatgtcagcttcagggcccaaaagctcagctcccaga
gggtttgggagaagaacaacagtaggaagtgctcagaaaagaactcagaagaagaacgat
gaaaaagatagcaatgcaacttccacagtaactaatgatggtttaggtgtcagtaagctg
cctgaagccaaagctaatgtacaaaaacaaggttctcctgttattggtgagagcattgtg
ttagaagatgaggctttggttgaacaaaagttgaaagctgaaagagagagtctccgtaag
aaggaaatagaatcacttgcggaggaagctttggcaagaggcgatagaatgtttgtgtat
cctcttgtggccaaacctgacgaagacataaaagtgtttctcaacaagactctctcaact
ctgagcagcgaaccagatgttctgatcatgggggcgtttaacgactggagatggaagtct
ttcacgaggagattggaaaagacaaaggagctccatggagactggctgtcatgtctcctc
cacatccccaaagaagcttataagatggacttcgtgttcttcaacggacaaagcgtttac
gacaacaacgactcaaaagacttctgtgtagatgttaaaggagggatggataaagttgag
ttcgagaattttcttcttgaagagaaatggagagagcaagagaagctagctaaggaagaa
gctgagaggaaacggcaagaggaagagaagagaagaaacgaagctagaaaggctgctatt
gaagctgatagagagcaagctaaagtggagactcagaagagacgtgagatgatgctacaa
ccagctcttcagaaagctgttgtctcatctgagagtgtttggtacattgagccaaaagat
ttcaaaggtggagataaagtgaagatatactacaataaaagctctggtcctttagcttat
gccaaagaagtatggatacatggagggtttaataactggattgatggattatctattatt
gaaaagctaaaggctgattcaaagagcgaagactggtggtttgctgaagtgatagtgccg
gtcaatgctctagtcattgactgggtctttgctgatggaccgcctaaagaagcgtttcta
tatgacaacaatagtcaccaagacttccacgaacttgttcctctaagaactccagaagag
ctttactggtcagaggaagagagcttgatgtttaggaagcttcaggaggagagaaggtta
aaagaggaagctatgcgtgtcaagatggagacaacagctcgtttgaaagcagaaactaag
gagagaacacttaaaaagtttcttctttctcagaaagacgtggtgtacacggagcctcta
gagattcaagcgggaagatccgtgacggttttctacaacccttcgaacacggttttgaat
gggaagcctgagatttggtttagaggctcttttaaccgttggactcatcggttgggtcct
ttgcctcctcagaaaatggaagcagcagatgatggaagctcccacatgaagacttcagct
aaggttccattagatgcttacatgatggactttgttttctccgagaaagaggatggtgga
gtgtttgataacagatatggtttggattaccacttacctgtagtgggaggtattgccaag
gagccaccgttgcacattgttcatattgctgttgaaatggcacccattgcaaaggttgga
ggcttaggtgatgttgtcactagtctatctcgtgctgttcaagaactaaaccataatgta
gatatcatcttcccaaagtatgattgcataaagtacaacttagtgaaggacttgcagttc
aacagaagctatcactggggagacactgaaataaaagtttggcatggcaaagtggaaggc
gtttcggtttacttcttagatcctcagaacggattgttccagcgaggatgtgtttacggt
tgtgcagatgatgcaggaagatttggtttcttctgtcacgcggctcttgagttccttctc
aaaggaggttttcatccagacattcttcactgtcacgactggtccagtgctccagtttca
tggctgttcaaggatcattacacgcattacggtttgattaaaacacgcgttgtcttcaca
atccataacttggagtttggagcaagtgctattggtaaagccatgacattttcagacaaa
gccacaacggtttcacgaacgtatgccaaggaagttgctggaaactctgtaatctctccg
catctatacaagttccacggaatagtaaacgggatcgatccagacatttgggatccatac
aacgataacttcattccggtgccttacacttcagagaacgtagtagaaggcaaaagagca
gccaaggaagaattacaaaacaggcttggactaaagagagccgatcttcctctagtggga
atcattacacgcttaactcaccagaaaggaatacatttgatcaaacacgctattcggcgt
accttggaacgcaacggacaggttgtgttgctaggctcagctcctgatccaaggatccaa
aatgatttcgtgaacttggcgaatcagttgcattctacacacggtgatcgagctcggctt
gtgcttacctacgatgaacctctttcccatttgatctatgctggggctgactttattctt
gtaccgtcaatatttgagccgtgtggactgacacagctcatagctatgagatacggtgct
gttcctgtcgtaagaaaaactggaggactctatgacactgtttttgatgtggaccatgat
aaagaaagggcacaagctcaagttctagagcccaatggcttcagttttgatggggctgat
gctcctggtgtggattatgcactcaacagggcgatatcggcttggtacgatgggagagag
tggtttaactcgctgtgtaagacggtgatggagcaagactggtcatggaatcgtcctgca
cttgagtacattgagctctatcactctgcacgcaagtga
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