Brassica napus (rape): 106415055
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Entry
106415055 CDS
T04128
Name
(RefSeq) uncharacterized protein LOC106415055 isoform X1
KO
K17925
sorting nexin-13
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bna04990
]
106415055
Domain-containing proteins not elsewhere classified [BR:
bna04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
106415055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
106415055
NCBI-ProteinID:
XP_048621204
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All DBs
Position
C8:complement(45657021..45662194)
Genome browser
AA seq
1012 aa
AA seq
DB search
MSSQVRDLVEEAKKRIVILVICVVGLSYLLSLTSSSVWVNLPAAACLIVLLRYFSFDVEM
KRKAAAYNSKPSSLSGPSLSKPPELPKAAPRSDWRSKVNSQVVEDALDRFTRHLVSEWVL
DLWYSRLTPDKQGPEELVFIINHVLGELSRRFRNVNLIDLLTRDIIDIICRHVELFRECQ
AKIERKGRRSLSFEERDSELRRVMATNDKLHPALFSPESEHKVLQHIMDRLISLTFRPED
MHCAFFHYTVRELLACCVMRPVINLANPRFINERIEAAVISRTNTNGGSSAAKETSQSED
LSEVSHDHFSRYLDPSVTGVELVQLKNEQQKRKNATNKQHVADLAKDPLLSMDTRSSRSW
ESLPLTSKIVDDSKYLQGHRGGEGWGDVLEKMSQRKTETLSPEHLESVWAKGRNYKKKEG
ERVPPRLSIKESCNDGDNARPKNFNENTVNARGSSQPKVVDSHLSSYSSAEEDEETNSSH
SSTSEDEETVTGLNSPGTRVWDGRTNKNPSVSRIHHPLENSGRRFKQTSKGHERYEKTSR
HRSSRKRSKRSGLIQGDDDSDDSEHDSLARSYSGISATSSASYNSVAEGDLLSAPRSSLL
VDSFAKLRCEVMGANIVKSSSKMFAVYSISVTDDSNHSWSIKRRFRHFEELHQRLKVFPE
YNLYLPPKHFLSTGVDIPVIHERCVLLDTYLKKLLQLPRISGSIEVWDFLSVDSQTYAFS
SSFSIIETLTVKPARKTSTVSTSIANMTEAAPAPLPSRENLSSENGKSGQHVRNNVMVDD
LKSKVKAPGNDHTKTSDADVRKSKENGGLKVGNQAEAMAFPGLPTEWVPPKLTLPLLDLV
DVVLQLQEGGWIRRKAFWVAKQILQLGMGDALDDWVLEKIRLLRRGTVVASGIQRVEQIL
WPDGIFMTKHPKRKQQSSTSDEEQQQEAERRAKFVHELMIEKAPATIVSLVGQNEYKQCA
EDLYFFLQSSVCLKQLAFDLLELLLLSAFPEMEKAFKQLRDEKHLFGQYTPN
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccaggttcgggacctggtagaggaagccaagaagcggatcgtgatactggtg
atatgcgtcgtcggactctcatacctcctctctctgacgagttcatcggtttgggtcaac
ctccctgcagctgcgtgcttgatcgtcctccttcgttacttctcattcgacgtcgaaatg
aaaagaaaggctgcagcttacaacagcaaaccttcttcactgagtggaccgtctctaagt
aagcctccagagcttcctaaagcagctccacggtctgactggagaagcaaagttaactca
caggtggttgaggacgcattggatcgcttcactcgccacctcgtttcggaatgggtgctt
gatctctggtactcccgcttaacaccagataagcaaggtcctgaggagctggtgtttatt
attaaccatgttctcggggaactttcgcggcggtttaggaacgttaatctcattgatctg
ttgacaagggatataattgatattatatgtcgtcatgtggagcttttccgtgagtgtcaa
gcaaagattgagagaaaaggaagaagaagcctcagtttcgaagagagagactcagaacta
agacgtgtgatggccacaaatgataaattgcaccctgccttattctctcctgaatctgag
cataaggttttgcagcatataatggacagactcatttcactaacgtttaggccagaggat
atgcactgtgcttttttccattataccgtgagggagcttcttgcttgctgtgtgatgcga
ccagtcattaatttagccaatcctcggttcattaatgagaggattgaagctgctgtgata
tcaaggacaaatactaatggcggatctagtgctgcaaaagagacttctcaatctgaagat
ctctcggaagtttctcatgatcatttttcgagatacctggacccctctgtcacaggtgtt
gagcttgtacaactgaaaaatgaacagcagaaaaggaaaaatgctacaaataaacagcat
gtagcagatttggccaaagatccattgctttcaatggacactcgatcttcccgatcgtgg
gagtccctccccttaacttccaaaatagttgatgatagtaaatatcttcaagggcatcga
ggaggagagggatggggtgacgtattagagaagatgtcacaaaggaaaactgagaccctt
tctccagagcatcttgaaagcgtgtgggcaaaaggaagaaattataaaaagaaggaaggt
gagagggtgcccccgagactttctatcaaggaatcgtgcaacgatggtgataatgcacgg
cctaaaaacttcaatgaaaacactgtgaatgcaagaggatccagtcagcctaaggtagta
gacagtcacttatcaagttattcctctgctgaagaggacgaggaaacaaacagtagtcat
tcttctacatctgaggacgaggaaacggtaacaggtctaaacagtcctgggactcgagtc
tgggatggtcgaacgaacaaaaatcctagtgtgtcacggatacaccatccacttgaaaat
tctggtcgtcgtttcaaacagaccagtaaagggcatgaacgttatgagaaaacatccagg
catcggtctagcaggaagagatccaaacgttctggactcattcaaggcgatgatgatagc
gatgattctgaacatgattctttggcgagatcatatagtggcatctctgcaacatcgtct
gcatcatacaattcagtggcggaaggtgaccttctcagtgcccctagaagttcattgttg
gttgattcctttgccaagttgagatgtgaggttatgggtgccaatattgtgaagagtagt
tctaagatgtttgccgtgtattcaatttccgtcacagatgatagtaatcatagctggtct
atcaaaagaagatttcgacattttgaagagcttcaccagcggcttaaagtgtttcccgag
tacaatctttatttaccgccgaagcatttcctatcaacaggcgtagacatacctgttata
cacgagcgatgtgtactgcttgatacctatctcaagaagcttttgcaactaccaagaatt
tcaggatcaattgaagtgtgggacttccttagtgtggattcccagacttatgccttctca
agttctttctctatcattgagacgctcacggttaaacctgcccgtaagacatctacagtt
tctacaagtatagctaatatgaccgaggcggcgccagctcctcttccttcgagagaaaac
ctgagttcagagaatgggaaatcgggtcaacatgtgaggaataacgttatggtggatgat
ctgaagtcaaaagtgaaagctcctggaaatgatcatacgaagacgtctgatgcagatgtg
agaaaaagcaaagagaacggcgggcttaaagtgggtaatcaagctgaggcaatggccttc
cccggcctgcccacagagtgggttcctccaaagctaacattgcccctactagacttggta
gatgttgtcttacagctccaggagggtgggtggatcaggcggaaagctttttgggttgcc
aaacagatacttcaactcgggatgggcgatgcattagacgattgggtactcgagaaaatt
cgtcttttgcggcggggaactgtagttgcttctggaattcagcgggttgaacagatacta
tggccggatgggatatttatgacaaaacatccaaaaagaaagcaacaatccagtacttct
gacgaggagcagcaacaagaagcagagagacgagccaagtttgttcatgaattaatgatt
gaaaaagccccagcgactatagtgagccttgtgggtcaaaacgagtataaacaatgtgcg
gaagacctctacttcttccttcagtcatcagtgtgtctaaagcaattagcatttgacctc
ctggagctgttgctactctctgcgtttccggaaatggagaaggctttcaaacagttgcgt
gacgaaaaacacctctttggtcaatacacaccaaactga
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