Brassica napus (rape): 106415062
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Entry
106415062 CDS
T04128
Name
(RefSeq) structural maintenance of chromosomes protein 1-like
KO
K06636
structural maintenance of chromosome 1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106415062
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106415062
Meiosis-specific proteins
Cohesin complex and associated proteins
106415062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_29
AAA_21
ABC_tran
AAA_15
AAA_27
Laminin_II
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
106415062
NCBI-ProteinID:
XP_013711133
LinkDB
All DBs
Position
A9:34564377..34572057
Genome browser
AA seq
1219 aa
AA seq
DB search
MPAIQSPPGRILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGAGKSNLMDAISFVLGVRT
GQLRGSQLKDLIYAFDDREKEQRGRKAFVRLVYLLDDGVELRFTRTITSSGGSEYRIDNR
VVNWEEYNAKLRSIGILVKARNFLVFQGDVESVASKNSKELTGLLEQISGSDELKKEYEE
LEEKKAIAEEKAALIYQKKKTIGAEKKLKKAQKEEAEKHLKLQDELKALKREHFLWQLYN
IENDIEKANEDVDAEKNNRKDVMAKLEKFEHEAGKRKIEQAKYLKEIAQREKKIAERSSK
LGKYQPELLRLKEEIARIKSKIESSRKEVDKRKKEKGKHSKEIEQMQKSIKDLNEKMNEL
NERRQDSSGKLPMLDSQLQEYFRIKEEAGMKTIKLRDEKEVLDRQYHTDLEALRNLEENY
QQLINRENDLDEQIERMKSRQKEIEDSSSEYKNETTSLKKQLRSLQEKHRDARNASENLK
TRIAELEDQLSDLTAERYENERDSRLTQAVESLKRLFQGVHGRMTDLCRPNRKKYNLAVT
VAMGRFMDAVVVEDENTGKDCIKYLKEQRLPPMTFIPLQSVRVKPVLERLRNLDGTAKLA
FDVIQFDPELEKAVLFAVGNTLVCDDLDEAKRLSWTGERFKVVTVDGILLTKAGTMTGGT
SGGMEAKSNKWDDKKIEGLMKKKEEYELELEKVGSIRDMQIKESEISGKISGLEKKIQYA
EIEKKSIKDKLPHLEQEKRNITEESRRINVELSKSRAEVDKRNTEIRKLEKRINEIVDRI
YRDFSQSVGVANIREYEEKQLKEAQEVAEERLNLSNQLAKLKYQVEYEQNRDVGSRIRKL
ESSISSLETDLEKIQKRKSELKELTEKATNEINNWKKEMGECKQKSEEYEKEILDWKKQA
SQATTSITKLNRQINSKETQIEQLISQKQEIAEQCELERIALPVLSDAAEEEDDSDGPQY
DFSELDRAHLQERRPSARDKMDAEFRQKIESKSSEIERTAPNLRALDQYEAIQEKEKQVS
QEFEAARKEEKQVADAYNTVKQKRYELFMEAFNHISSIIDKIYKQLTKSNTHPLGGTAYL
NLENEDDPFLHGIKYTTMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYRPSPFFILDEV
DAALDNLNVAKVAQFIRSKSCQAARDNQDAEDGHGFQSIVISLKDSFYDKAEALVGVYRD
VDKSCSSTMSFDLRNYAES
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgccggccatccaatccccgccggggaggatcctgcagctcgagatggagaatttcaag
tcctacaaaggtcaccagctagtaggccccttcaaggacttcacggcgatcatcggtccc
aacggcgccggcaaatccaacctaatggacgctattagcttcgtcctcggagttcgcacc
ggtcagcttcgtggatctcagcttaaggatctgatctacgcgttcgacgatcgagagaag
gagcagagagggaggaaagcgttcgttcgccttgtctatctccttgacgatggagtggag
cttcgtttcactcgtacgattacgagctctggtgggagtgagtatcggattgataataga
gttgtgaattgggaagagtacaatgcgaagctgagatctatagggatacttgttaaggct
cgtaacttcttagtgtttcagggtgatgttgaatccgttgcttcgaagaattcgaaagag
ctcactggacttctcgagcagatctctggctctgatgagcttaagaaagagtatgaggag
ttggaggagaagaaggccatcgctgaagagaaagcagctcttatatatcagaagaagaag
acgattggcgctgagaagaagctgaagaaagcgcagaaggaagaagctgagaagcatcta
aagctgcaagacgaactgaaagctttgaagagggaacattttctgtggcaattatataac
attgagaatgatatcgagaaggcaaatgaagatgttgatgctgaaaagaacaatcgtaag
gatgtcatggcgaagctggagaagtttgagcatgaagctggtaagagaaagatagaacaa
gctaagtatttgaaagaaattgctcaacgtgaaaagaagattgctgagagaagctccaag
cttggaaaataccaacctgagcttctgagattgaaggaggagatagctcgcataaaatca
aaaattgagagcagtcgaaaggaggtggataagaggaaaaaagaaaaagggaagcattcc
aaagaaattgaacagatgcagaaaagcatcaaggatctgaatgagaaaatgaacgaatta
aacgagaggagacaagatagcagtggaaagctcccaatgcttgacagtcaactgcaagag
tattttcgaataaaagaagaagctgggatgaaaaccattaagctaagagatgaaaaagag
gtgctagataggcaatatcatactgatctcgaagcactgagaaatctggaagaaaattac
cagcaactgataaatagggagaatgatcttgatgaacaaattgagcgaatgaaatccagg
caaaaagagattgaagattcatcctcggaatataagaacgaaacaactagtctaaaaaag
cagttacgatcactgcaagaaaagcaccgagatgccaggaatgcatctgagaatctgaag
actagaatcgcagagttagaagatcagttaagtgatctaacggctgaaagatatgaaaat
gagagagatagcaggctaacgcaggctgttgagtctctcaagcgtctattccaaggagtt
catggtcgaatgactgatctgtgtcgaccaaatcggaagaagtacaaccttgcagttact
gttgctatggggcgatttatggatgcagtagttgtagaagatgaaaacacaggaaaggac
tgcatcaagtacttgaaagagcaaaggcttcctcctatgacatttattcctcttcagtca
gtacgtgtcaagccagtgcttgaaagattaagaaatttggacggcacagcaaagctggcg
ttcgatgttatccagttcgatcctgaattagagaaggcggtcctctttgctgttggaaat
actctcgtctgtgacgaccttgacgaagccaagcgtcttagctggactggagagagattt
aaagttgttactgttgatggcatactactcacaaaggcgggaacaatgactggtggtacc
agtggtggaatggaagcaaagtctaacaaatgggatgacaaaaaaattgaaggactgatg
aaaaagaaagaagaatatgaactggaactggaaaaggttggatctattcgagatatgcag
ataaaggagtccgaaatatcgggtaaaataagtggacttgagaaaaagattcagtatgcc
gaaatcgagaagaaaagcatcaaagacaaacttccacatcttgagcaagagaagcggaat
attactgaagaaagtagacgcataaatgttgaactttctaagtcaagagctgaggttgat
aagaggaatacagaaatcaggaagttggagaaaagaatcaatgagattgtggaccgtatc
tatagggattttagccagtctgttggtgttgctaatatacgtgaatatgaagaaaaacag
ctcaaggaggctcaagaagtggctgaagaaaggctgaatctgagtaaccagcttgctaag
ttaaaataccaggtggaatatgagcaaaaccgagatgtggggtcacgaattcggaagcta
gaatcttctatcagttctttggaaactgatttggaaaaaatacagaagaggaagtctgaa
cttaaggagttaacagaaaaagctactaatgaaatcaacaactggaaaaaggaaatggga
gagtgcaaacaaaaatcagaagagtatgaaaaagaaatcctggattggaaaaagcaggct
tctcaagcgacaactagcataaccaaactcaatcgtcagataaattctaaggaaacccaa
attgagcagctgatctcgcaaaaacaggaaatagctgagcagtgtgagcttgaacgtatt
gcccttcctgttttatcagatgctgcggaggaggaagatgactcagatgggccacagtat
gactttagtgagttggatagagctcatctccaagaacggagaccatctgctcgtgacaaa
atggatgcggaatttaggcaaaaaatagaatctaaatcgtcagagattgaaagaacggcc
ccaaacttgagagcacttgaccagtatgaggctatacaagagaaagagaaacaagttagc
caagagtttgaagctgccaggaaggaggagaaacaagtagcggatgcatacaatactgtt
aagcagaagaggtatgagctatttatggaagcgttcaatcacatttctagcatcattgac
aagatctacaaacagctaaccaagagtaacacgcatccactgggtgggactgcttatcta
aacctagagaatgaggatgatccgtttctacatggtataaagtatactacaatgccccca
acaaagcgtttccgtgatatggaacagctgtctggaggggagaaaacagttgcagctttg
gcattgctcttctccatccatagctataggccttcgccctttttcatactggatgaagtg
gatgctgcgctcgataatttaaacgttgcaaaagtcgctcagtttattcgtagcaaatcc
tgccaagcagcacgtgacaatcaggatgcagaggatgggcatggcttccaaagcattgta
atatctctcaaggacagcttctatgacaaggccgaagctctggttggagtttacagagac
gtcgataagagttgctcgagtacgatgtcttttgaccttaggaactatgcagagtcgtga
DBGET
integrated database retrieval system
