Brassica napus (rape): 106415152
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Entry
106415152 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 22
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106415152
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106415152
04147 Exosome [BR:
bna04147
]
106415152
04090 CD molecules [BR:
bna04090
]
106415152
Enzymes [BR:
bna01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
106415152
Transporters [BR:
bna02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106415152
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106415152
CD molecules [BR:
bna04090
]
Proteins
106415152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
ABC_ATPase
AAA_22
Zeta_toxin
AAA_23
AAA_16
RsgA_GTPase
AAA_15
AAA_30
AAA
AAA_28
DEAD
nSTAND1
DLIC
YobI-ATPase
HUTI_composite_bact
Motif
Other DBs
NCBI-GeneID:
106415152
NCBI-ProteinID:
XP_013711242
LinkDB
All DBs
Position
A6:24528019..24532591
Genome browser
AA seq
1231 aa
AA seq
DB search
MKIWGSIRLIFMNADGVDWMLMGLGLIGAIGDGFIAPIIFFFTGLLLNDIGGSFNDVTFM
KAVSKNAVAMLSVAGASWVVCFLEGYCWTRTGERRAARMRERYLKAVLRQDVVYFDLHVT
STSDITKSVFSDSLVMQDVLSEKLPNFLMSASAFVASYVVAFIMLWRLAIVGFPFIVLPL
IPGLMYGRSLISITRKIREEYKEAGSIAEQAISLVRTVYAFGSETKLIAKFSAALEGSMK
LGLRQGLAKGLALGSNGIIYAIWGFMTWYGSRMVMYHGAKGGNIFAVIMCVTSGGISLGR
GFSNLKYFSEVVVAGEKITKMIKRVPGIDSDNMGGQILNNFKGEVHFNHVKFMYPSRPET
PIFEDLCLRIPSGKTVALVGGSGSGKSTVISLLQRFYDPVAGEVLIDDVPIYKLQVKWLR
SQMGLVSQEPVLFATSIKQNILFGKEDASMDEVMEAAKASNAHTFISQFPHGYKTQVGER
GVQMSGGQKQRIAIARAIIKLPKILLLDEATSALDSESERVVLEALDNASAGRTTIVIAH
RLSTIRNADVICVVHNGRIVETGSHEELMENWDGHYTSLVRLQQMENEEYDVNISVRVQG
GQLSILSKDLKYSPKLSFVDSRSNLATNSTIDSNLSGSIHKDKKTHVPSFKRLMAMNRPE
WKHAMCGCLSAAFYGAVQPLNAYVVGSMVSMYFLTSHDKIREKTRIYVLVFVGLALFVFL
TNIVQHYSFAYMGENLTKRIREKMLTKMLTFEVNWFDEGQNSSGAACSRLAKEANLVRSL
IGERVSLLVQTISGVAIACTLGLVIAWRLAIVMIAVQPVIVVCFYTQRILLKSMSKKAIK
AQDESCKLAAEAVSNIRTIIAFSSQERILKLLNRVQEGPRRESVRQSWLAGIVLGTSRSL
LACTTILNYWYGGRLIADGKIVAKAFFEMFMIFVSTGRAIADAGTMTTDLAKGSDAVGSV
FAVLDRCTTIEPEDPNGYLPEKIKGIIRFVNVDFAYPTRPNVVIFKDFSIEIEEGKSTAI
VGPSGSGKSTIISLIERLYDPLKGSVRIDGRDLKSYHLRSLRQHIALVSQEPALFAGTIR
ENIMYGAASENIDESEIIEAAKAANAHEFITSLSNGYDTTCGDRGVQLSGGQKQRIAIAR
AVLKNPSVLLLDEATSALDSQSERMVQDALERVMVGRTSVVISHRLSTIQNCDTIAVLDK
GKVVECDHSSLLAKGPTGAYFSLVSLQRNLC
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttggggaagcataagattgatttttatgaacgcggacggtgtggactggatg
ttgatgggattaggattaatcggagccattggtgatggcttcatcgctcctattatattt
ttcttcaccggcttactactgaatgacataggtggttctttcaatgatgtaaccttcatg
aaagccgtctccaagaatgctgtagctatgctttctgtggctggtgcatcttgggtggtc
tgtttccttgaaggatattgctggacaagaacaggggagagacgagcagcaagaatgagg
gagagatacttgaaagcagtgttgagacaagatgtggtttactttgatcttcatgtcacc
agcacttctgatattaccaaaagtgttttcagtgacagcctcgtcatgcaagacgtcctc
agcgaaaagttaccgaactttttgatgagtgcatctgcatttgtcgcaagctacgtagtg
gctttcatcatgctgtggagactcgcaatcgtaggcttcccatttatcgttctccccttg
atccctggactgatgtacggacgatccctcatcagcatcacgaggaaaatacgggaagag
tacaaagaagctggatctattgccgagcaagccatctctttggtgcgaactgtctacgca
tttggcagtgagactaagttgattgccaaattctcagctgcacttgagggctcgatgaag
ctaggtttaagacaaggattagctaaaggactagcccttgggagcaatggtatcatctac
gccatttgggggttcatgacttggtacggaagtcggatggttatgtaccacggcgccaaa
ggcggtaacatctttgcagtcattatgtgcgttacctctggcggcatatcacttggtcga
ggtttttcgaatctcaaatatttttcagaggtagttgtagcaggggaaaagattaccaaa
atgataaaaagagttccgggtattgattcggacaacatgggaggtcaaattctaaataac
tttaaaggagaagtacactttaaccatgtgaaatttatgtacccctctagacctgaaacc
ccaatctttgaggatttatgtttgagaattccatccggaaaaactgtggctctggttggt
ggaagcgggtcgggaaaatcaactgttatatcgcttttgcagaggttctatgacccagtc
gcaggagaggttctaatagatgatgtgcccatttataagctgcaggtgaagtggttgagg
tcccaaatgggtctagttagccaagagccagtgctcttcgccacatctataaagcaaaat
atattatttggtaaagaagatgcgtccatggatgaagtaatggaagctgcaaaggcctca
aatgctcatactttcatctctcagttccctcatggttacaaaactcaggttggagagaga
ggagtgcaaatgtcaggaggtcagaagcagaggatcgcaattgcacgtgcgataatcaaa
ttaccaaaaattctccttttagacgaggcaacaagtgcactagactcagaatcagaaagg
gtagtcctagaagccttggacaatgcctctgctggccgtacaactattgttattgcacac
cgcctatctactattcgtaatgctgatgttatttgtgtagtccataatggccgcattgta
gaaactggatcacatgaagagctcatggagaattgggatggtcactatacttctctagtt
cgcttgcaacagatggagaatgaagaatatgatgttaacatcagtgtaagggtgcaaggg
ggtcaattatcgattttgagcaaagatttgaagtatagtccaaaactctcttttgtcgat
agcaggtctaacttggcaacaaattcaaccattgattcgaatctttctggttcgatacat
aaggataagaagacgcatgtgccatcgtttaagagattgatggcaatgaatagaccagag
tggaaacatgcaatgtgtggttgcttaagtgcagctttttatggggccgtacaaccacta
aacgcatatgttgtaggatcaatggtgtcaatgtatttcctaacaagtcatgacaagatc
agggagaaaacaaggatctacgtgttggtttttgttggtctagctctgtttgttttcttg
actaatatcgttcaacattatagttttgcttacatgggcgaaaacctaacaaaacgtatc
cgagaaaagatgctcacaaagatgctgacctttgaagtcaactggttcgatgaaggccag
aactccagtggtgcagcttgctcaagacttgcgaaagaagctaacttggtgaggtcgctg
attggtgaacgggtgtcattgttggtacaaaccatatcgggagtggctatagcttgcaca
cttggtttggtcatcgcttggcgattagccattgtgatgattgcggtacaaccagttatt
gttgtgtgtttctacactcaacgcattctgctcaaaagcatgtccaaaaaagcaattaaa
gcccaagatgagagttgcaaactagccgcagaagctgtctccaatattcgaaccatcata
gctttctcgtcacaggaacggattttgaaattactcaatagggtccaagagggtccacgg
agagaaagcgttcgccagtcgtggttagcagggattgtgctggggacttcccgaagcctt
ttagcatgcacaacgattttgaattactggtatggtggaagattaatagcagatggaaaa
atcgtggcaaaagcattctttgagatgtttatgatctttgtgagtacgggccgggctatt
gcagacgctgggaccatgactaccgatctagccaagggctcggatgcagttgggtctgtg
tttgcagtgttagatcgatgtacaaccattgagccggaggacccaaatggctatcttccg
gaaaagataaagggaataatcaggtttgtcaacgtggactttgcttaccccacccgacca
aatgtggttatattcaaggacttttccattgagatagaggagggaaagtcgacagctatt
gtaggtccaagtgggtcaggtaagtcgacaataattagtttgatcgagcggctctatgac
ccgttaaagggttctgtgagaatcgatggccgtgatctaaagtcgtatcatttgaggtcg
cttcgtcaacacatagctttggttagccaagagccagctttattcgccggcactatccga
gagaacataatgtatggagcagcatctgaaaacatcgacgagtcggagatcatcgaggcg
gcaaaggcagcaaacgcccacgaattcatcacatcactatcgaacggctacgacacgacc
tgcggagacagaggagtacaactatcgggtgggcaaaaacagaggattgctatagctcgt
gcggttttgaagaacccgtccgtgcttctcctggatgaagccacgagcgctttggacagc
cagtctgagcgcatggtccaggacgcactcgagcgagtgatggtcgggaggacgagcgta
gtgatctcgcataggcttagcacgatccagaactgcgacacgatcgcggttttggacaaa
gggaaagtagttgaatgtgaccactcgtccttgttggcaaagggtcctacaggagcttac
ttctcattggtcagtctccaaagaaatctctgttga
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integrated database retrieval system
