KEGG   Brassica napus (rape): 106415222
Entry
106415222         CDS       T04128                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
bna  Brassica napus (rape)
Pathway
bna03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    106415222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bna03400]
    106415222
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     106415222
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM
Other DBs
NCBI-GeneID: 106415222
NCBI-ProteinID: XP_013711320
LinkDB
Position
A6:complement(24599215..24606169)
AA seq 1459 aa
MGVQGLWELLAPVGRRVSVETLAGKRLAIDASIWMVQFIKAMRDEKGDMVQNAHLIGFFR
RICKLLFLKTKPVFVFDGGTPALKRRTVIARRRQRENAQTKIRKTAEKLLLNRLKEMRLK
EQANDLKKQRLQQSKSAGDKKRVSSVSLQEPLRGSADEDGAGGSCFQEEKIDEISSATMV
GESVSDDAMKMSSKYDPKGKGVLLNEDDLDNRMKSNLEQGCSAGTKDYQEKLAEMLAASL
AAEEEGTFTNKASSSAAEIPSEEEGSEEDEQILLPAMNGNVDPAVLASLPPSMQLDLLVQ
MREKLMSENRQKYQKVKKAPEKFSELQIEAYLKTVAFRREINEVQRSAGGRAVGGVQTSR
IASEANREFIFSSSFSGDKEVLASAREGRNDGNEKNTPQQSLPVPVKNISSGNKSDATTE
LEKDETANPDENIEVYIDERGRLRIRNKHMGIQMTRDIQRNLHLMKEKEKAAFGSTSNND
DETSNAWENFPSEDQFLENLPVNKDDVMNLDNPNDDSMLQNQSAIEISFEHDGGGKDLDD
EDDMFLRLAAGGPVTISSAENDPKENSLSWASDSDWEEVPVEQSSVISKLEVNSSNQHIP
EDIISDEEAAREDTTCENVSNSMENDTVTKFSKGYLEEEADLQEAIQKSLLDLHDKESED
LLEENQTVGVNLVDDKPTQDSLCSSETVGKAEEEGTLDGIPILKASGAINEQSNTSVTED
GHIDITKQIGTHPSSSSDNVRRAVGNEMPQVKPVISPEKSFTIASESSMVSTMAKHNNED
GSESFGGESIKVSPMPIADEERISSHIEILYDTDSQQETREENKLDHRTFNIESSIDLEE
KTVPVELSEAILEEEMRVLDQEYVNLGDEQRKLERNAESVSSEMFAEIQELLQIFGLPYI
IAPMEAEAQCAFMEQSNLIDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEKEL
GLGRDKIIRMAMLLGSDYTEGISGIGIVNAIEVVTAFPEDDGLQKFREWVESPDPTILGK
TDAKAGSGVKKRGSGSADNESTSGVSADDTQEIKQIFMDKHRKVSKNWHIPATFPSEAVI
SAYLNPQVDRSTEIFSWGKPDLLVLRKLCWEKFGWNGKKTDDLLLPVLKEYEKRETQLRM
EAFYSFSERFAKIRSKRIKKAVKGIGGGLSSEVVDHNLQEGPRKGNKKRLSPHETEDNIS
EKDLGKTDEKEKNKRKRSEKPSSSRSRGRAQNRGRGRGRKNLIPELSDGSSDGEGDDNDN
EVGLQAPNEAKPGGNPHKVRRSTRSRNPVKYSEKEDDQLDESRGNGESLSENLDDDDDDF
LKNLGKLGNVSEERTQNEPTTMDASNNDCPSEDYIQMGGGGFCVDEAETGGDAHVEDKAS
DDYKVMGGGFCVDEDETGKEDDAMDEEVLETEDVNSQNKAKRQNEDASLEEYGGGIEIGN
SSAGGLSAMPFLKRKKRKN
NT seq 4380 nt   +upstreamnt  +downstreamnt
atgggagtgcaagggctttgggagctactggctcccgttggtcgccgcgtctccgtcgaa
accctagccgggaaacgattggctatcgatgcgagtatatggatggttcagtttattaag
gcgatgcgagacgagaagggcgatatggttcagaacgctcacttgatcggttttttccgg
aggatttgcaaacttttgttcctaaagactaagcctgttttcgtctttgacggtggcact
ccggcgttgaaacgccgcactgtcattgcgcgtcgtcgtcagcgtgagaacgctcagacg
aaaattaggaaaaccgctgagaagttgctgcttaatcgactcaaggagatgaggcttaag
gaacaagccaatgatcttaagaagcagagactacagcagagtaagagtgctggagataag
aagcgtgtatcgtctgtatctctgcaagagcctttgcgaggctctgcagatgaagatggt
gcagggggcagttgttttcaggaggaaaagatagatgagatatcttcagcaactatggtc
ggagaaagtgtcagtgatgatgctatgaaaatgtcttcgaagtatgatcctaagggaaaa
ggagttttgttgaacgaggatgacctagataacagaatgaagagtaatcttgaacagggt
tgctcagcagggacgaaggattatcaggaaaagttggctgagatgttggcggcatccctt
gcagccgaagaagagggaacttttactaacaaagcatcgtcttcagctgcagaaattcca
tctgaggaagagggtagcgaagaagatgagcaaattcttttgccagcaatgaatgggaat
gtcgacccagctgttttggcttctcttcctccatccatgcaacttgatcttcttgttcag
atgagagaaaaattgatgtcagaaaaccggcaaaagtaccaaaaggtcaagaaggcccct
gaaaagttttccgaattgcaaatagaagcatatctcaaaactgtagccttccgtcgagaa
ataaatgaagttcagagaagtgctggtgggagggctgtcggtggtgttcaaacttctagg
atagcttctgaggcgaacagagagtttatcttctcatcttctttttctggcgataaagaa
gtacttgcgtctgccagagaaggaagaaatgatggaaatgagaaaaatacgccacaacag
tctttgccggtccctgttaagaatatttcttcggggaataaatcagatgctactaccgag
ttggagaaagatgaaaccgcgaatcctgatgaaaatattgaagtttatatagatgaaagg
gggcgtctaagaataaggaacaaacacatggggatccaaatgactcgtgatatccagaga
aacttacatttgatgaaagaaaaggagaaagcagcttttggttctacgtcgaacaatgat
gatgaaacgtccaacgcctgggagaactttccttctgaggaccagtttctagagaattta
cctgtcaataaagatgatgttatgaatctagataatccgaatgatgattccatgctgcaa
aatcagtctgcaatagagatatcatttgaacatgatggtggtgggaaagatcttgatgat
gaagatgatatgtttcttcggttggcagcgggaggaccagtgactattagttctgcagaa
aatgatcccaaagaaaactctttgtcgtgggcatctgacagtgattgggaagaagtgcct
gttgaacagagtagtgttatctctaagcttgaagtgaattcaagcaatcagcatattccc
gaggatattatttccgatgaagaggcagcaagggaagacactacttgtgaaaatgtcagt
aactccatggagaacgatacagtaacaaagttctcaaaaggttatttggaagaagaagct
gatttgcaagaggctatccagaaaagtcttcttgacttgcatgataaggaatccgaggat
ctccttgaagaaaatcaaaccgtgggggtaaacctagttgatgacaagccaactcaggat
agtctgtgttctagtgaaaccgttggtaaagctgaggaagagggaactttggacggaata
ccaatcttgaaagctagtggtgctataaatgagcagtccaacacttcggtaacggaagat
ggtcacatagatataacaaaacaaattggtactcacccgtcttccagttctgacaacgtc
agacgtgctgtgggaaacgaaatgccacaagtaaagccagttatctcacccgagaaatca
tttactattgctagtgagagcagcatggtgtccaccatggctaagcacaataatgaagat
ggttctgaaagttttggtggtgaatctatcaaagtgtctcctatgcccatagctgatgag
gagagaatcagttcgcacatagagatactctatgacacagattcacagcaagaaacaagg
gaggaaaataaattggaccaccgcacttttaatattgagagttcaatagatttagaagag
aaaaccgtgcctgttgaactttcagaagcaattttggaggaggaaatgcgagttcttgat
caagaatatgtaaatttgggtgatgaacagaggaaacttgagaggaatgctgaatctgtt
agcagtgagatgtttgcggaaatccaggagctactccaaatatttgggttaccatacatc
atagctcccatggaagcagaggcacagtgtgcatttatggaacaatcaaaccttattgat
ggcattgtcactgacgattctgatgtattcttgtttggagcaaggagtgtgtacaaaaat
atatttgatgatcgcaagtatgtggagacatactttatgaaggacattgagaaggagctt
ggcttgggcagagataaaataatccgcatggcaatgctgctaggaagtgattacacggaa
ggaatcagtggaattggtattgtcaatgctattgaagttgttactgcatttccagaggat
gatgggcttcaaaaatttcgtgaatgggttgaatcacctgatccaaccattttaggcaag
actgatgcaaaagcaggttccggtgtaaagaagcgtggatctggctccgcagataatgaa
agcacctcaggtgtctcggctgatgacacacaagaaatcaagcaaatcttcatggataag
cataggaaggtaagcaagaactggcacattccagctactttccctagtgaagctgttatt
tctgcctacttaaatccacaagtggaccggtcgactgagattttctcatggggcaagcct
gatctcttagttcttagaaagctatgctgggaaaagtttggttggaacggtaagaagaca
gatgatctgctacttcctgtcttgaaggagtacgaaaaacgcgagacgcaacttcgtatg
gaagctttctattccttcagtgaaagatttgcaaagatccgtagcaaaaggattaaaaag
gctgtcaaaggaattggcggaggtctatcgtcagaagtggttgatcataatctccaggaa
ggtccaagaaagggaaacaagaaaagactctctccccatgaaaccgaagataatatttca
gagaaagatttaggtaaaaccgatgagaaggagaaaaacaaaaggaaacgctctgaaaaa
ccatctagtagtagaagcagaggcagagctcagaacagaggacgcggaaggggccggaaa
aacctcatccctgagctatcagacggtagttctgatggtgagggtgatgacaatgataat
gaagttggtttgcaggcacctaatgaagcaaaaccaggaggaaatcctcataaagtgcga
aggtcaacacgatctcggaatcctgtgaagtacagtgagaaagaagatgatcagttggac
gagtcgagaggcaatggagaatcccttagtgagaatttggacgatgatgatgatgatttc
ctcaaaaatttaggcaaattagggaatgtctctgaagagagaacacagaatgaaccaaca
accatggatgcatcgaataacgattgtccttctgaagactatattcaaatgggaggtggt
gggttctgcgtagatgaagctgagactggaggagatgctcatgtggaggataaagctagt
gatgattacaaagtgatgggtggtggattctgtgttgatgaagatgaaacaggtaaggaa
gatgatgcgatggatgaagaggtgttagaaacagaggatgtaaacagccaaaacaaagct
aaacgtcaaaacgaggatgcatcattggaggagtatggtggtggcattgaaattgggaat
tcttcagctggaggattaagtgctatgcctttcttgaagagaaagaagaggaagaactga

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