Brassica napus (rape): 106415239
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Entry
106415239 CDS
T04128
Name
(RefSeq) tryptophan synthase alpha chain, chloroplastic
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
bna
Brassica napus (rape)
Pathway
bna00260
Glycine, serine and threonine metabolism
bna00400
Phenylalanine, tyrosine and tryptophan biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01230
Biosynthesis of amino acids
Module
bna_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
106415239
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
106415239
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
106415239
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Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
ThiG
NanE
Ribul_P_3_epim
BtpA
FMN_dh
Motif
Other DBs
NCBI-GeneID:
106415239
NCBI-ProteinID:
XP_048620598
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All DBs
Position
C8:complement(37138763..37140780)
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AA seq
311 aa
AA seq
DB search
MAIAFKSGVCFLHSPKPQIGIRHSSPDSSLSFKRLAPIAALSTSSPTLGLADTFKELKKQ
GKVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLEK
GTNLDSILDMLDKVLPELSCPVSLFTYYNPILKRGLGKFMSSIRDVGVQGLVVPDVPLEE
TEFLRKEALNNSIELVLLTTPTTPTERMKRIVDASEGFIYLVSSIGVTGARASVSGKVQS
LLKDIKEATDKPVAVGFGISKPEHVKQIAGWGADGVIVGSAMVRLLGDAKSPTEGLKELE
SLTKSLKSALL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgctttcaaatcgggcgtctgcttcctccactccccaaaaccccaaatcgga
atccgccactcttctcccgattcctccctctctttcaagagattggctcccatcgctgcc
ctctccacctcttcccccaccctcggtctcgccgatactttcaaggagctcaaaaaacaa
ggcaaagtagcattcataccgtacatcacagctggtgatccagatctctctaccaccgcg
gaagcattgaaagttcttgacgcttgtggttccgacattatcgaacttggagttccttac
tctgacccattagctgatggacctgttattcaggctgcggcgacaaggtctttggagaag
ggtaccaaccttgatagcattcttgacatgttggataaggttcttccagagttatcttgt
cctgtttcgctgttcacgtattacaacccgattcttaaacgtgggttggggaagttcatg
tccagcatcagagatgtcggtgtccaggggcttgttgttccagatgttcctcttgaggaa
actgagtttctgagaaaagaagcacttaacaacagcattgaactggtcctactcactaca
ccaacaacaccaacagagagaatgaagagaattgttgacgcatcagaaggatttatttac
cttgtgagctcaattggagtgacgggtgcacgtgcatctgtaagcgggaaggtccagtcg
ctcttgaaggatatcaaagaggcaacagacaagccagtggctgtcggttttggaatatca
aagcctgagcatgtgaaacagatagctggatggggagctgatggagtgattgtaggcagt
gcaatggtgaggcttttgggagatgctaagtcgccaacggaagggctcaaggagcttgag
agtctcacaaagtctctcaaatctgctcttctttga
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