Brassica napus (rape): 106415333
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Entry
106415333 CDS
T04128
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106415333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106415333
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106415333
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
U-box type E3
106415333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Neurochondrin
HEAT_2
zf-Nse
KAP
zf-RING_UBOX
MCAfunc
zf-C3HC4_4
MLKL_N
RPW8
zf-C3HC4_2
zf-C3HC4
zf-NOSIP
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
106415333
NCBI-ProteinID:
XP_013711453
UniProt:
A0A816XZF2
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All DBs
Position
A1:15060162..15062871
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AA seq
658 aa
AA seq
DB search
MEEEKGAVAQSLIDVVNEISSVSEYRTTVKKLCSNLARRLKLLVPMFEEIRESNEPISED
TLKTLVSLKEAMSSAKNHLKFCSQGSKIYLVMEREQVTSKLLEVSVQLEQSLSKIPYEDL
DISDEVREQVELVLSQFRRAKGRVDASDDELYEDLQSLCIKSSDVDDYQPTLQRVARKLH
LMEIPDLAQESVALHEMVASSGGESIEEMAMVLKLIKDFVQIDTDNSEDQSAGVNSSSNG
QTSTAASHKIPVIPDDFRCPISLEMMRDPVIVSTGQTYERTCIEKWIEAGHSTCPKTQQA
LTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAY
GNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLATPDSRIQEHSVTALLNLSI
CENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVV
LLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTQPGSGMVDEALAILAI
LSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSVDPQHLVEAQKLGLMG
PLIDLAGNGTDRGKRKAAQLLERISRLAEQQKETAAQAQNTEEAEPTHSASTTEAADT
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagaaaggtgcggttgcgcagagcttaattgatgtagtgaacgagatttcg
tccgtttccgagtaccgtacaacggtgaagaagctctgcagtaacctggcgaggaggttg
aagctgcttgttccgatgttcgaggaaatcagagagagtaacgagccgatcagtgaagat
acgttgaagacgttggtctccttgaaggaagccatgtcctcggccaagaatcatcttaaa
ttctgcagccaaggcagcaagatttatctggtcatggagagggaacaagtgacaagtaaa
ttgctggaggtttcagttcaattagagcaatctttgagcaagattccgtatgaggatctt
gacatctccgatgaagttagagaacaggttgagttagttctcagccagtttcggcgagcc
aaaggaagagtagatgcatcagacgatgaactgtatgaagatcttcagtcactgtgcatc
aaaagcagtgacgtagatgattatcaacctaccctgcagcgggttgctaggaagttacat
ctgatggagattcctgacctagctcaagaatcagtggctctgcacgaaatggttgcttcg
agcggtggtgaaagcattgaggagatggcaatggtacttaagctgattaaggattttgtg
cagattgacactgacaatagcgaggaccagagtgctggggtaaactcgagtagcaatggg
caaacttctacggctgctagtcacaagataccggtgattcctgatgatttccgctgtcca
atatctctggaaatgatgagagatccagttatcgtttcaacagggcagacctacgaacgc
acctgcatcgagaagtggatagaagctgggcattcgacatgtccaaaaacacagcaggcg
ctaacaagcacaaccctcacacccaactatgttctccgaagtctgatagctcagtggtgc
gaggccaatgatatcgagcctccaaaacctccgagcagtttaaggcccaggaaagtatca
tccttttcctccccagcagaagcaaacaagatcgaagatcttatgtggaggctggcttac
ggaaaccctgaggaccaacgatctgcagctggagaaatccgcctccttgcaaaacgaaat
gcagacaaccgtgtggccatagctgaagctggagccatacctcttctcgttggcctcctc
gcaactcctgattctcgtatccaagaacattcggtaacagctcttctaaacctctccata
tgtgagaacaacaaaggggccattgtctctgctggagctatccctggtatagttcaagtg
ctcaagaaaggaagcatggaggctagagagaatgcagcggccacactcttcagtctctcc
gtgattgacgagaacaaagtgactattggtgccttgggagcaatcccaccgctcgttgta
ctgctcaatgaaggtacacaaagaggcaagaaagacgcggctactgcacttttcaacctc
tgcatatatcaaggaaacaaaggaaaggccatacgcgcaggagtgattcccacattgacg
agactcttaacacagcccggaagcggaatggtcgatgaggcgcttgccattctggcgatt
ctctcgagccatcccgaagggaaagcaatcataggatcatccgacgcagtcccgagtcta
gtggagtttatcagaactggatctcctagaaacagagagaacgctgctgcggttctagtc
cacctctgttctgttgacccacaacatctggtcgaagcacagaaactcggtcttatgggt
ccactgattgatttagccggaaacgggacagatagagggaaaagaaaagcagctcaattg
cttgaacgtataagccgtctagctgaacagcagaaggagacggcagcacaggcacaaaac
acagaagaagctgaaccaacacattcagcatccaccacagaagctgctgatacttaa
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