Brassica napus (rape): 106415422
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Entry
106415422 CDS
T04128
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106415422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106415422
Spliceosome [BR:
bna03041
]
Common components
Common spliceosomal components
SR proteins
106415422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RNA_bind
RRM_5
PHM7_cyt
Nup35_RRM_2
RRM_fung
DUF2129
Motif
Other DBs
NCBI-GeneID:
106415422
NCBI-ProteinID:
XP_048610350
LinkDB
All DBs
Position
C4:1241236..1243497
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AA seq
246 aa
AA seq
DB search
MRPVFVGNFEYETRQSELERLFSKYGRVERVDMKSGYAFVYFEDERDAEDAIRGIDNIPF
GYEKRRLSVEWAKGERGKPHGKAASNQRPTKTLFVINFDPIRTKERDIERHFEPYAKVLN
VRIRRNFAFVQFATQEDATKALESTQNSKLMDRVVSIEYALRDDDERDDRYAASPRRRSP
SPVYRRRPSPDYGRPRSPEYDRYKGPDAYERRRSPDYGRRSPEYGRARSPGYDRYRSRSP
VYRGRG
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtgttcgtggggaacttcgagtacgagactcgccaatcggagctggaacgg
ttgttcagcaagtacgggagagtggagcgcgttgacatgaagtctggttatgcttttgtg
tattttgaggatgagcgtgatgctgaggatgcaatccgtgggattgacaatatccctttt
ggctatgagaaacgcaggctctctgtcgaatgggctaagggtgaacgtgggaagccccat
ggaaaggcagcctcgaaccagaggcctacaaagacactctttgtcatcaacttcgaccct
atccgcaccaaagagcgcgatatcgagaggcattttgagccctatgccaaagttctcaac
gtccgcataagacgcaacttcgcattcgttcaatttgcaactcaggaagatgcaaccaag
gcccttgaatctacacaaaacagcaagttaatggacagggttgtttctattgagtatgct
ttgagggatgatgatgagcgagatgatagatacgctgctagtccgagaaggagatcccct
agtccagtgtacaggaggcgtcccagtcctgattacggccgtcctcgcagtcctgagtat
gacaggtacaagggtccagatgcttatgaaaggcgtaggagcccagattatggccgtcgc
agtccggaatacggtagagctaggagccccggttatgacagatacagaagccggtctcct
gtatacagaggaagaggttga
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