Brassica napus (rape): 106415505
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Entry
106415505 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 3
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106415505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106415505
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106415505
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
106415505
NCBI-ProteinID:
XP_022568325
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Position
C4:complement(1477400..1481200)
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AA seq
703 aa
AA seq
DB search
MEMMNLKRNTFVKFTENEDSWNRPSVTSVIKKTVRRSFEKGSEKIRNFKQQPLTFHSQKK
NENKKKIIRVMNPNDSYLQNWNKIFLLLCVVALAFDPLFFFIPVVDPGRFCLKLDKKLEA
VACVFRTFIDAFYVVHMLFQFNTGFIAPSSRGFGRGELVQSYKKIAVRYLKSYFIIDVLS
ILPIPQVVVLAVVPSMGRPASLVTKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTET
AWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWRETCAKIKGCIHAYLYCSGGEDNSQ
YLIGSCPLMDPEEIKNSTVFNFGIFAEALQSGVVESMDFPKKFFYCFWWGLRNLSALGQN
LKTSAFEGEIIFAVIICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMSHRM
LPDDLRKRVRKYEQYKWQETRGVEEEVLLSSLPKDLRKDIKRHLCLNMLKTVPWFKAMDD
RLLDALCARLKPALYTENSYIVREGEPLEDMVFIMRGKLTSTTTYGGKSGFFNSVSLGVG
QFCGDLLTWALDPNTSHFPISTSTVQAQTEVEGFVLSADDLKFVATQYRRINSKQLRHMF
RYHSVQWRTWAACFIQAAWKRYCRKKLSRALREEEERLENTLQTDDSGGNKLNLGAAIYA
SRFASHALRNVRANAAARNSMLPHMLSLLPQKPADPEFPMDET
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggagatgatgaatctcaaaagaaacacgtttgtaaagtttactgaaaatgaagattct
tggaacagaccttcagtaacttctgttattaaaaaaacagttagacgtagctttgagaaa
ggctcagagaagatcagaaactttaagcagcagccattaacgtttcattctcaaaagaag
aatgagaacaagaaaaagataatacgagtgatgaaccctaacgactcttatcttcaaaac
tggaacaagattttcttgctcctttgtgttgtagcgttagcatttgatcctctgtttttc
ttcatccccgtggtggatccaggcagattctgtcttaaactagacaagaaactcgaggca
gtggcttgtgttttccgcactttcatcgacgctttctatgtggttcacatgttgtttcag
tttaatactggcttcattgctccttcttctcgtggttttggaagaggagagcttgttcag
agttataaaaaaatcgctgtgagatacctcaagtcatactttataatcgatgttctttct
attctccctattcctcaggtagttgttctagctgttgttccatcgatgggtcgacctgcg
tcactggtaacaaaagagctactgaaatgggtaatattttgtcagtatgttccaaggatt
gcacgaatctatccgctttttaaagaagtaacaagaacgtccggtttggtaactgagact
gcatgggctggagctgctctaaacctattcctctacatgttagctagccatgtctttgga
tctttttggtacttgatatcgattgaaaggaaagatagatgttggcgtgaaacatgtgct
aagataaaaggttgcattcatgcgtacttatactgttcgggtggggaagacaatagccag
tatttaataggttcttgcccgttgatggacccagaggagattaaaaactcgactgttttc
aacttcggtatattcgctgaggcattgcagtctggagtcgtggagtcaatggacttccct
aagaagtttttctattgtttctggtggggtcttcgcaaccttagtgctctgggccaaaac
ttgaagacaagtgcctttgaaggagagatcattttcgcggtcatcatttgtatctctgga
ctagttttgtttgctcttctcataggaaacatgcagaaatatttgcaatcaactacggta
agagttgaggaaatgagggtgaaaaggagagatgcagagcaatggatgtctcaccgtatg
ttaccagacgatctgagaaaacgtgtacgtaaatacgaacagtataaatggcaagaaacc
agaggagttgaggaagaagttcttctctccagtcttccaaaagatctcagaaaggacatt
aaacgccatctttgcttgaatatgctcaaaacggtgccgtggtttaaagctatggatgat
cggttactagacgcactttgtgcacgtttgaaaccggctctctacacggagaacagttac
attgtgcgtgaaggtgaaccacttgaggatatggtgtttataatgagaggaaagttaact
agcacaaccacttatggcggcaaaagcggattcttcaattcggttagcttgggtgttggt
caattctgtggagatcttctcacatgggcactagatccaaacacttctcacttccctatc
tctactagcaccgttcaagctcagacagaagtcgaaggctttgttctctcagctgatgat
ctcaaatttgttgctactcagtatcgtcgcatcaatagcaagcaactacggcacatgttc
aggtatcactcagtgcagtggcgaacatgggcagcatgttttatacaagcagcatggaag
agatattgtagaaagaagctctcaagggctttacgtgaagaagaagaaagactagaaaat
actcttcagaccgatgattcaggaggcaataaacttaacttaggtgctgcgatttatgcg
tctaggtttgcttctcatgctctgaggaatgtaagggcgaatgcagcagcacgcaactct
atgcttcctcatatgctatctttattgcctcagaaaccagctgatcctgagtttcctatg
gatgaaacctaa
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