KEGG   Brassica napus (rape): 106415905
Entry
106415905         CDS       T04128                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
bna  Brassica napus (rape)
Pathway
bna03013  Nucleocytoplasmic transport
bna03015  mRNA surveillance pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106415905
  09122 Translation
   03013 Nucleocytoplasmic transport
    106415905
   03015 mRNA surveillance pathway
    106415905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106415905
   03041 Spliceosome [BR:bna03041]
    106415905
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106415905
    TREX complex
     106415905
Spliceosome [BR:bna03041]
 Complex C
  Other components
   EJC/TREX
    106415905
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106415905
SSDB
Motif
Pfam: RRM_1 FoP_duplication API5
Other DBs
NCBI-GeneID: 106415905
NCBI-ProteinID: XP_013712170
UniProt: A0A078H436
LinkDB
Position
A10:12376167..12377647
AA seq 239 aa
MSTGLDMSLDDMIAKNRKSRGSGPARGSGSGSGPIRRNNPNRKSNRSAPYQSAKAPESTW
EHDMYSDGSQAFPSRSSAGIETGTKLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRS
GRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIVGNNNLQSASAPSGRHGNGNFN
GAPRRGGQGRGGPQRRGGGGGQGGRGRGRRSGKGPTEKVSAEDLDADLDKYHAGDMETN
NT seq 720 nt   +upstreamnt  +downstreamnt
atgtcgactggattagatatgtctctcgacgacatgatcgccaagaaccgcaagtcccgc
ggatctggtcccgcccgtggatctggatccggatccggcccaatccgccgcaacaaccct
aatcggaaatcaaaccgatctgctccataccaatcggccaaggcgccggagtccacctgg
gaacacgacatgtactccgatggctcacaagctttcccttcccgttcttccgccggaatc
gaaaccgggacgaagctctacatctccaatttggattacggcgtcatgaacgatgacatc
aaggaactgtttgctgaagtaggagagcttaaacgctacactgttcactttgacaggagt
ggaagatcaaagggaactgctgaagttgtatactctcggcgtggtgatgcaatcgctgct
gtgaagaagtacaacgacgttcagctcgatggaaagcccatgaagattgagatcgtgggc
aacaacaatcttcagtctgcttctgctccgtctggtagacacgggaatggaaacttcaat
ggtgctccaaggcgaggaggacaagggagaggtggtccacaacgtcgtggtggtggtggt
ggtcaaggaggccgtggtcgtggcaggcgttccggcaagggtcctacagagaaggtatct
gctgaagatcttgatgcggatcttgataagtaccacgcaggagacatggagacaaactaa

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