Brassica napus (rape): 106416094
Help
Entry
106416094 CDS
T04128
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106416094
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106416094
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106416094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_16
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING_UBOX
DUF2921
zf_RING_Vps8
Prok-RING_4
zf-RING_Vps41
PHD_NSD
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
106416094
NCBI-ProteinID:
XP_022554683
LinkDB
All DBs
Position
C8:23759944..23763712
Genome browser
AA seq
565 aa
AA seq
DB search
MKKRQHLGVLGLGFVEFQIIFCLSIWLAFPQQATGLRPIREKARTWSDEWLFGRKQVSEG
GRFSAWNITGTYRGNWKFLDSLNSSSKFQDFQKSNGNSVVELVAVPTKITGVHYVQGVVL
FHDVFDNEQNLGGAQISLEGVYIWPFRQLRLVANSGKESDSGQDENNLLSNPYHLLGIFS
SQVFQESTRDRILQRKISARNEMDKHCNIEIAAQISRVASSDNNGDKSYYHMEGLMESPG
VGDDGDCFSPLFLNATSVNVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHGNTQSGAAK
VSIVMIGHQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKAT
RPSNSGEGWETMRRELSFLYSRFYGILLGGILIMYELHNYMRPILLLMYSFWIPQIVTNV
IRDSRKPLHPYYIVGMTATRLAIPLYVFGCPHNFMRVVPSKAWCVCLCTFMGLQAVILLL
QHYFGSRCFVPRQMLPEKYNYHRRFNQDVSRNTDCVICMTAINLRQRTSDFMVTPCEHFF
HTGCLQRWMDIKMECPTCRRSLPPA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgtcaacatttgggggttttgggattagggttcgtcgaatttcagatcatt
ttctgcttatcgatttggttggcgtttccgcagcaagctacggggcttagacccattagg
gagaaagctcgaacctggagcgacgagtggctctttggtagaaaacaagtatctgaagga
ggaaggttttccgcatggaacataacaggaacatatagagggaattggaagtttctggat
tcattaaatagctcttcgaagttccaagacttccagaaatcaaatggtaattctgtggtt
gagttagtggctgttccaacaaagataaccggtgtgcattatgttcagggtgtagtttta
ttccatgacgtatttgacaatgaacaaaatttgggtggtgcccaaataagtctggaaggt
gtatatatatggccctttagacaactccgccttgtggctaacagtggcaaggagagtgat
tcagggcaagatgagaataatcttctctcaaatccctatcatctgctcggaatcttttcc
tctcaagtgtttcaagaatctacaagagacagaatactgcaacggaagatttcggctaga
aatgagatggataaacactgtaacatcgaaatagcagctcagatatcccgtgttgcttct
agtgacaacaatggagacaaaagttattatcacatggaaggattgatggaaagtcctggg
gtaggcgatgacggagattgtttctcgcctttgttcctgaatgcaacttctgtgaatgtc
gaagtctactacaacaaagctgtgaactatacactgatggtcacttttgtctctttcctc
caggttcttttgttgatccggcaaatggagcacggtaacacacaatctggtgctgccaag
gtatccattgtaatgatcggacatcaagcaatcatggatgcttacttatgccttttacat
ctcactgctgggatattagttgaatctctatttaatgcatttgcaaccgccgcgttcttc
aaattcgtagtcttttcgattttcgagatgagatatcttctggccatatggaaagcaacc
aggccttccaacagcggagaaggttgggaaacaatgaggcgtgaactctcctttctctac
agccgattctatgggatcctacttggagggatattgataatgtacgagttgcacaactac
atgcggccgattcttcttctcatgtactcgttttggataccacagatagtcaccaatgtc
atccgggattcaagaaagcccctgcacccgtattacatcgtgggcatgactgctacacgg
ttagctataccgttatatgtttttggatgcccacacaacttcatgcgtgtagtgcctagc
aaggcctggtgcgtgtgcttgtgcacgttcatggggttgcaagctgtcattcttcttctt
cagcattactttggttcacgttgctttgttccccgtcagatgctaccagagaaatacaac
taccacagaagattcaatcaggacgtaagccgcaacactgactgtgtcatctgcatgaca
gctatcaatctcagacagcgtaccagtgatttcatggtaactccatgtgaacatttcttc
cacacgggatgcttacagagatggatggatataaagatggagtgcccgacttgtaggcgt
tccctgcctccagcttag
DBGET
integrated database retrieval system
