Brassica napus (rape): 106416267
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Entry
106416267 CDS
T04128
Name
(RefSeq) pectinesterase/pectinesterase inhibitor 18
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106416267
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
106416267
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Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
106416267
NCBI-ProteinID:
XP_013712580
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Position
A9:complement(42596750..42599569)
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AA seq
556 aa
AA seq
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MSNSTQPLLSKPKSLNHKSLCLVLSFAAILGFATFFTTQVIFTNTTTDDSLLTPSQICHG
AHDPDSCQTLLSEFTTLSLSKPKRLDLLHVFLKNSVWQLESTTNMVNEARTRSNEVRDKA
HFADCKEMMDVSKDRMVSSMEELRGGNLNLESYSNVHTWLSSVLTNYMTCLDSISDVSID
SKHRVQPKLEDLVSRARVALSIFVSVLPSKDYLEMILPIHFPSWLNSLDRKLLESAPKTF
EVKANVVVAKDGTGKYKTVNEAVAAAPENSNSRYVIYVKKGVYKETIDIGKKKKNLMLVG
DGKDVTIITGSLNVVDGSTTFRSATVAANGDGFMAQDIWFQNTAGPAKHQAVALRVSADQ
SVINRCRIDAYQDTLYTHTLRQFYRDSFITGTVDFIFGNSAVVFQNCDIVARKPGAGQKN
MLTAQGREDPNQNTAISFQKCRLTASSDLAPVKGSVKTYLGRPWKLYSRTVIMQSFIDNH
IDPAGWFPWDGDFALSTLYYGEYANNGPGADTSKRVKWKGFKVIRDSKEADQFTVAKLIQ
GGLWLKPTGVTFQEGL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtccaattcaactcaaccacttctttccaaaccaaagtctcttaaccacaagagtcta
tgccttgtcctctcctttgcagccattcttggctttgcaactttcttcacaacccaagta
atcttcactaacaccaccactgatgattccttattaaccccaagccagatctgccatgga
gctcacgacccagactcatgccaaactctcttgtccgaattcacgacgttgtcgctctcc
aagcccaaacgtcttgacctattgcacgtgttcttgaaaaactcggtatggcaactcgaa
agcacgacaaacatggtgaacgaggctagaacccgctctaacgaggtgagagacaaggcc
cactttgcggactgtaaagagatgatggacgtatcaaaggatcgaatggtcagttcgatg
gaggaactccgaggagggaaccttaatcttgagtcttactcaaacgttcacacttggctg
agcagtgtgcttacaaactatatgacatgtttagacagcataagtgatgtctccatcgac
tctaaacatagagtccagccaaagcttgaagatttggtttctagagctagagtggctcta
tccatctttgtctccgtattgccttcaaaagactacctagagatgatccttcccattcac
ttcccgtcttggctaaattctctcgacaggaagcttttagaatctgctcccaagacattt
gaagtgaaggcaaacgtggtggtggcaaaagacggcaccggaaagtacaaaacagtaaac
gaggcggtggcggcagcaccagagaatagcaattcaagatatgttatatacgtgaagaaa
ggagtttacaaagaaactattgacatcggaaagaagaagaagaacttaatgcttgttggc
gatggcaaagacgtaacgatcataaccggtagtttaaatgtcgttgacggatccaccacc
tttagatccgcaacagtagctgccaacggtgatgggtttatggcacaagacatatggttc
cagaacacggccggaccagcaaagcatcaggccgtggctctccgcgtgagtgctgaccaa
tcggtcataaaccgttgccgcatagacgcttatcaagacacgctctacactcacaccctg
cgacaattctaccgcgacagcttcataacgggcaccgtagactttatattcggaaactcc
gcggtcgtatttcaaaactgcgacatcgtggcgcggaagcctggtgctggacaaaagaac
atgctgacggctcagggacgtgaggatcctaaccagaacacagctatctcgttccaaaaa
tgtagattaacggctagctctgatcttgctccggtaaaaggatctgtgaagacgtacctt
ggacggccgtggaagttgtactcaaggacagtgatcatgcagtctttcatcgacaaccat
attgacccggccggttggttcccatgggacggtgattttgcgctctccaccttgtactac
ggagagtatgcgaataatgggcctggagcggatacgagtaagagagtgaagtggaagggg
tttaaagttattagagactcaaaagaggccgatcagtttactgttgcgaagcttatccaa
ggaggattatggctgaagcccactggagttactttccaagaggggctttga
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