Brassica napus (rape): 106416287
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Entry
106416287 CDS
T04128
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
bna04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106416287
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106416287
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106416287
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106416287
03036 Chromosome and associated proteins [BR:
bna03036
]
106416287
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106416287
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106416287
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106416287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
Phage_Inh_C
Motif
Other DBs
NCBI-GeneID:
106416287
NCBI-ProteinID:
XP_013712600
UniProt:
A0A078I5U6
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All DBs
Position
A1:17238238..17241788
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AA seq
540 aa
AA seq
DB search
MAQSKAMESLTLDIELLQLPETSPMSMKSNQDFVKKLFDQWLALPETNRLVASLVNDVKS
GVALNVVSGGSSATNSGSNSPLASMFPARNGPPLSPRNSTGSPRITRQRTGLSNLSSPLK
VVSDHVKELIPQFYFEDGRPPPNDQKEQCIAKINTLFHGHEDGLQLQEFKLVTSEICKVP
SFFSTSIFRKVDTNNTGFVKREAFIDYWVKGNMLTKEIATQIFTILKQPDKKYLVQDDFK
PVLQELLATHPGLEFLQGTPEFQDRYAETVIYRIYYYINRSGNGHLTLRELKRGNLVDAM
QHADEEEDIIKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYSNHALTYRIVDRI
FSQVPRKFTSKTEGKMCYEDFVYFILAEEDKSSEPSLEYWFKCIDLDANGVLTRNELQFF
YEEQLHRMECMAQEAVLFEDILCQLFDMVKPEDEGYICLNDLKGSKLSGNVFNILFNLNK
FMAFETRDPFLIRQERANPTWTEWDRFAHREYIRLSMEEDVEDASNGSAEAWDDSLEVSF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatccaaggcgatggagtctctaacgctcgatatagagctgttacagctgccg
gagacgtcaccaatgtcgatgaaatcgaatcaagacttcgtgaagaagctctttgatcaa
tggcttgcgcttcctgaaaccaatcgcctggtagcatctttggtgaatgatgtcaaatct
ggagtcgcattgaatgttgtctctggaggctcttctgctacaaattcagggtctaatagt
cctttggcttcaatgtttccggcacgcaatggccctcctctttctcccaggaactccacc
ggctctcctcggatcactagacaaaggactggtctctctaatcttagctctcctctcaaa
gttgtttctgaccatgtcaaagaactcattcctcagttttactttgaagatggtcgccca
ccacccaatgaccaaaaagagcagtgcatagctaagatcaacacacttttccatggccat
gaggatggtttgcaattgcaagaatttaaattggtcacttctgagatctgcaaggttcca
tcatttttctccacctctattttcagaaaagttgataccaataacactggttttgtgaaa
agagaagccttcattgattattgggttaagggaaatatgttgacaaaggagatagcaact
cagatatttacaattctgaagcaaccagataagaagtaccttgtccaggatgatttcaag
cctgttctccaagaactattggcaacacaccctggtcttgaattcttgcaaggcacacct
gagtttcaggatagatatgctgaaactgtaatatacagaatatattactacataaatagg
agtgggaatggtcatcttaccttaagagagcttaagcgaggaaatttagttgacgcaatg
caacatgccgatgaagaagaggatataattaaggtgttgaggtacttctcttatgagcat
ttctatgtcatatattgcaagttctgggagctggatacagaccatgatttcttgatcgac
aaagagaatctcatcagatacagtaaccatgctctcacctacaggattgtcgaccgaatc
ttttctcaggtaccaaggaagtttactagtaaaaccgaaggaaagatgtgttatgaggat
ttcgtttatttcattctggctgaagaagacaagtcatcagaacctagtctagagtattgg
ttcaagtgcatagatttggatgcaaatggtgtcctgacacggaatgagctgcaattcttt
tatgaggagcagctgcatagaatggaatgcatggcgcaagaggcggtgctttttgaggat
attttgtgccaattatttgatatggtcaaaccagaagacgaagggtacatttgtctgaat
gatttgaagggctctaaactttccggaaatgttttcaatatacttttcaacctgaacaag
tttatggcgtttgaaacacgtgatcccttcctcattcgccaggagcgcgcaaatcctaca
tggaccgagtgggatcgttttgctcatagggaatacattaggctatctatggaagaagac
gtcgaagatgcgtctaacggaagtgctgaagcatgggacgactcgcttgaggtctccttt
tga
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