Brassica napus (rape): 106416332
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Entry
106416332 CDS
T04128
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106416332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106416332
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106416332
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
106416332
NCBI-ProteinID:
XP_013712646
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All DBs
Position
A9:complement(39938710..39941141)
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AA seq
323 aa
AA seq
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MFFDGYHYHGTSFEQTYRCYPASFIDKPQIESGDKIIMPPSALDRLASLHIDYPMLFELR
NAGIERVSHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVKVRNVTLPKGTYVKLQPHTT
DFLDISNPKAILETALRNYSCLTTGDSIMVPYNNKKYFIDIVETKPANGISIIETDCEVD
FAPPLDYKEPERPKTAPAAAKGPAKAEEVVPEPEPKFNPFTGSGRRLDGRPLSYEPPAAS
ASSSSSSKDKQPAVANGNGQASVASSSSARQAQGKLVFGGNANRAPKEAPKVGAGKETKP
EEEEKKEEPKFQAFTGKKYSLRG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgacggataccattaccatggaacctcctttgagcagacttaccggtgttat
cctgcatcttttatcgacaagccccaaattgaaagtggtgacaagattataatgccacca
tcagcacttgaccgtctcgcctctctgcatattgactatccaatgctgtttgaacttcgt
aatgctggaatcgaacgtgtttcacactgtggagtccttgagttcatcgctgaagaaggc
atgatttacatgccatattggatgatgcagaatcttctgctgcaagaaggagacattgtg
aaagtcagaaacgtcactcttccaaagggaacctatgttaagctacagccgcacactacg
gacttcctggatatatctaatccgaaagccatcttggagactgctttgaggaattactca
tgcctaaccactggggatagcattatggttccgtacaacaataagaagtactttatagat
atagttgaaacaaagcctgctaatggaatcagcatcattgagacagactgtgaggttgat
tttgcacctccccttgattacaaggagcctgaacgtcccaaaacagcacctgctgcagct
aagggtccggctaaagcagaggaagttgtgcctgaacctgaaccaaagttcaaccctttc
actggatctggaagacggttagatgggagacctctttcgtatgagccgccagctgcatct
gcttcctcctcctctagctcaaaagataaacagcctgctgttgctaatgggaatggacag
gcttctgtagcaagtagtagctctgctcgacaggctcaaggaaagcttgtgtttggggga
aacgcaaaccgtgctccaaaagaagctccaaaggttggagctggaaaagagacgaaacca
gaggaagaggagaagaaagaagagcctaagttccaagctttcactgggaagaagtattcg
ttgaggggttga
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