Brassica napus (rape): 106416425
Help
Entry
106416425 CDS
T04128
Name
(RefSeq) metalloendoproteinase 5-MMP-like
KO
K07761
metalloendoproteinase 5-MMP [EC:3.4.24.-]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106416425
Peptidases and inhibitors [BR:
bna01002
]
Metallo peptidases
Family M10
106416425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
PG_binding_1
Reprolysin_3
Peptidase_M54
Metallopep
DUF4953
Reprolysin_4
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
106416425
NCBI-ProteinID:
XP_013712754
UniProt:
A0A816NUD2
LinkDB
All DBs
Position
A9:complement(10961060..10962584)
Genome browser
AA seq
394 aa
AA seq
DB search
MLRFSTTCHVYQLQHRVEKWSKCSIITPDVVSSSFFPSKKMRFLQLLTLLSLLVVIVTPI
SATFYTNISSIPPLHLLNATRSAWETFEKLTGCHVGDKADGLSKLKQYFSRFGYIPAAVD
NFTDDFDDVLQSAITTYQKNFNLKVTGKLDASTLGQIVKPRCGNPDMIDGTTSEMNAGKK
LRTVARYSFFPGKPQWPKRNRDLSYAFFPLNNLTEEVKQVFARAFTRWADVTPLNFTRSE
SILRADIVIGFFAGDHGDGEPFDGPMGTLAHASSPPTGMFHLDGDEDWLISGEDVSRQIL
PVTSVVDLESVAVHEIGHLLGLGHSSVEDAIMYPAISGGHRKVELAKDDIEGIQHLYGDG
GSNRRSETSGGAEFWRGLVFSLSSIATCILLICC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgattttcaacaacttgtcacgtgtaccaattacaacaccgtgtggaaaaatgg
agcaagtgtagcattataacacccgacgtcgtttcatcttcatttttcccatccaagaaa
atgagatttctgcaactgctaacgcttctgagcctcctcgtcgtcatagtgactccaatc
tcagcgacattctacaccaacatctcttccataccaccgttacacctcctaaacgccact
cgaagcgcgtgggaaactttcgagaaactaaccggttgccacgtcggagacaaagccgac
ggcctctccaaactcaaacaatacttcagtcgtttcggttacatccccgccgccgtcgat
aacttcaccgacgacttcgacgacgtcctccaatcagccatcaccacttaccagaagaac
ttcaacctcaaagtcaccggcaaactcgacgcgtcgactctaggccagatcgttaaaccg
agatgcggcaacccggacatgatcgacggcactacgtcggagatgaacgccggtaagaag
ctccgtacggtggcgcgttactcgtttttccccgggaagccgcagtggccgaaacggaat
cgagatctgagctacgcgttttttcctctcaacaatctaacggaagaagtgaagcaagtg
ttcgcacgcgccttcacgcgctgggcggacgttacgccgttgaacttcacgcgctctgag
tccatccttagggccgatatagtgatcgggtttttcgccggcgatcacggggacggagag
ccgttcgatggaccgatggggacgctagcgcacgcgtcgtctccgcctacggggatgttt
catctcgacggcgacgaggattggctgatctcgggagaggatgtgagccgtcagatattg
ccggtgacgtcggtggtggatctggagtcggtcgctgtacacgagatcggacatctgctt
gggttaggtcactcgtcggtggaggatgcgattatgtatccggcgatttccggtggacat
cggaaggtggagttagcgaaggatgatattgaggggatacagcatctgtatggagacggt
ggttctaaccgtcgaagtgaaaccagcggtggtgctgagttctggagagggttggtgttt
agcctatcttcgatcgccacgtgtatacttttgatttgttgctag
DBGET
integrated database retrieval system
