Brassica napus (rape): 106416691
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Entry
106416691 CDS
T04128
Symbol
BNAC09G35310D
Name
(RefSeq) protein GAMETOPHYTE DEFECTIVE 1
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106416691 (BNAC09G35310D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106416691 (BNAC09G35310D)
03016 Transfer RNA biogenesis [BR:
bna03016
]
106416691 (BNAC09G35310D)
03029 Mitochondrial biogenesis [BR:
bna03029
]
106416691 (BNAC09G35310D)
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
106416691 (BNAC09G35310D)
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
106416691 (BNAC09G35310D)
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
106416691 (BNAC09G35310D)
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
106416691 (BNAC09G35310D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
106416691
NCBI-ProteinID:
XP_013713061
UniProt:
A0A816JEK9
LinkDB
All DBs
Position
C9:51160365..51163021
Genome browser
AA seq
660 aa
AA seq
DB search
MAFFDLSIPYSYPSPSGGKEIIVPNKLRVKLATKAMELGYVGIAHNHSIEGAMSEKDSCT
IPLLTLGSLVKAAPRLASSVAFHRDLLNAPRSTPFRQYTRVTVKLESKAQCLGLNSGNPV
LKSYDIVAVRPMNQYAFDQACAKAEVDVISIDFSNLQFRLMHPLVKAAVKRGVYFEIKYS
HLLSDAEKRRQVISNAKLLVDWTKGKNLIISSGAPSENKGPPSVTELRGPNDVINLMSLL
GLSSERARAAISVNCRNMIAKILKKKRFHKEAVKVELLSSSETFSLEQPLSGDCMKWDPL
SSGEGDMLLEDLAKAFEATTRPVAHKAFDFTSDRNGLPSRGFRIGNILGTEPLTQPLAAK
IIDARVLCKNQVSEVCMADSVSCDDNLGENETISQIDMLVSEDDHIVEPTTNVPLSSQGQ
GVLVQDEAAASFSLIRCTESDAASDVNMQTELDSEDKSMSPSKSDHGIQQSHVENLNMET
IGVDDEVPVDGVNKEGAGFCHANIEQPTSTGVDEMKIDEANHDEYMEVTVEDQKHETGDN
NIILPTLSSSETTDLLRESSNSLSPEAVGQDLDQVSRLESSEAELGEEPSVQYEITMEDK
KDTETNQQARVKSSERNNSRNSGKVRAKRSWVRLTQLQPLKPFLLQRFKRISKRRKHRRA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcgacctaagcatcccctacagctacccatccccatcaggcgggaaagaa
atcatcgtcccaaacaaactccgcgtaaagctcgccacgaaagccatggagctcggctac
gtcgggatcgcgcacaaccactcgatcgaaggcgcaatgtcggagaaagactcttgcacg
atccctcttctcaccctcggatctctcgtcaaagccgctccgcgactagcttcctccgtc
gcgttccaccgcgacctactcaacgcccctcgatccactccgtttcggcagtacactcgc
gtcaccgtgaaactcgagagtaaggctcagtgcctggggctgaactccgggaacccggtt
ttgaagagctacgatatcgttgcggttaggccgatgaatcagtacgcgttcgatcaggct
tgtgcgaaagctgaggttgatgttatctcgattgatttctcgaatttgcagtttcggttg
atgcatccgttggttaaagctgctgttaagcgtggggtttactttgagatcaagtactct
catctcttgagcgatgctgagaagaggagacaagttatatccaatgctaagttactagtg
gattggactaaggggaagaatctgattatatcgagtggtgctccttcagaaaataaaggt
cctccttcagtcacggaacttagaggtcctaacgatgttattaatctcatgtcattgctt
ggactctctagtgagagagccagagctgccatttcagtgaactgtaggaatatgatagcc
aagattttaaagaagaagcggtttcacaaagaagctgtcaaggttgagttgctttcttct
agtgaaacctttagccttgaacagcctctgtctggagattgtatgaaatgggatcctctt
tcgagcggcgaaggtgacatgcttttggaagatctcgcaaaggcttttgaagctaccaca
cgtcctgtggcgcacaaagcgtttgatttcacctctgatcgtaatggcttgccgtcacgt
ggtttccggatcggtaatattctaggaactgaacctttgactcagccacttgcagctaag
attattgacgcacgagttctctgtaagaatcaagtttctgaagtgtgtatggcagattca
gtttcatgtgatgataatctcggggaaaacgaaaccattagccaaattgacatgctggtt
tctgaagatgaccacatagtggaacctacaacgaatgtcccactgtctagccagggacag
ggagttttggtgcaagatgaagcagctgcatcattttcattgataagatgtacagagtca
gatgcagcttctgatgttaacatgcagactgagttggattctgaagataaatcaatgtcg
ccatcaaaaagtgatcacgggatccaacaaagtcatgttgaaaacttaaacatggaaact
attggtgttgatgatgaagtcccagtggacggagtcaacaaagaaggagctgggttttgt
catgctaatattgagcaacctacatccactggtgttgatgagatgaaaatcgatgaagca
aatcacgacgagtacatggaggtgacagtggaagaccagaagcatgaaacaggtgacaat
aatattattcttcctaccttatcctcttctgagactaccgatttgctaagagaatcgagt
aactctctcagtccagaggcggttggacaagaccttgaccaagtatcaaggttagagtcc
agtgaggcagagcttggggaagagccatctgttcaatacgagataacaatggaagacaag
aaggacacggaaactaatcaacaagcccgtgtcaagtcctctgaaagaaacaattccaga
aactcaggtaaggtacgagctaagaggagttgggttagattaacgcaactacaacctttg
aagccttttctacttcaacgtttcaaacgaattagtaaaagaagaaaacatagaagagct
tga
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