Brassica napus (rape): 106417162
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Entry
106417162 CDS
T04128
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106417162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106417162
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106417162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
106417162
NCBI-ProteinID:
XP_048624296
LinkDB
All DBs
Position
C9:complement(28719093..28721826)
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AA seq
391 aa
AA seq
DB search
MRGLKRAAVSEPNQSPFKNAKPVEGSLFGTQSSLSPAASLDKQRAELARKHVKALNNQFV
SWVQIQLKNHPDELWEDGMNDYITHASNILEKFKDVVNWLKENKGKGENASPESRGPEKK
PMAEVKNSDVKPVSNTSLFTSNNQPGLFLTNQSSSFSTSHQSGSFSSQPGVFSSSPFGLA
SNSQTGSFSSGQFGLAKSSPPSLFSSTQAGGISNSQPSFSFSNNQNPFSSGVTPVSIPAK
RDSPDDAEAEDEPPQPSSPSVKKTEEKGVTVVHEVKCKLYVKSNDPTDKGAWKDKGTGNL
YIKCKEGVDKGTKESKPTIIVRNDVGKLLLNALLYTGIKTSTQKNALVAIFHSSQEDSNE
KVTPRTFLIRTKTAEARDKLATAIQEYAPSS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaggggactcaaacgcgccgctgtttccgaacccaaccaatccccatttaagaatgca
aaaccagtggaaggatccttgtttggtacccagagttcgttatcgccggccgcatcattg
gataaacagagggctgagttagctaggaagcatgtgaaagctcttaataaccaatttgta
agttgggtgcaaatacagctgaagaatcatcctgatgaactttgggaagatgggatgaat
gactacattacccatgcttccaacattctggaaaagttcaaagatgttgtcaactggcta
aaagaaaataaaggaaagggtgagaatgcatccccagaatctcgtggaccagagaagaaa
ccaatggctgaagtcaagaatagcgacgttaaaccagtttcaaataccagcttgtttact
tcaaacaatcagcctgggctcttcttaaccaatcaatcttccagtttttccactagtcat
cagtctggttcgttttcaagccagcctggagtattctccagcagtccatttggtttagca
tccaatagccaaactggatcttttagcagtggccagtttggtttagccaagagcagccca
cctagcctattttctagcactcaagcaggagggatctctaatagccaaccttctttctca
ttttctaataaccaaaaccctttttcatctggagttactccagtgtccatacctgcaaag
cgagattctccagatgatgcagaggctgaagatgaaccacctcaaccgagcagcccatct
gtcaaaaaaaccgaagagaagggagttactgtggttcatgaagttaaatgcaaactctat
gtcaagtcaaatgacccaacagataaaggtgcatggaaagataaaggaacggggaatctc
tacataaaatgcaaagaaggcgtcgacaaggggacaaaagaatctaagcccacaattatt
gtcagaaacgatgttgggaaactgcttctgaatgctctactatacactggaatcaagact
agcacacagaagaacgcacttgttgcaatattccattcatcgcaggaggattccaacgag
aaagtaacacctagaacctttctgataaggacaaagacagcagaggctagggataagtta
gcaacagccatccaagaatacgcaccttcttcataa
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