Brassica napus (rape): 106417501
Help
Entry
106417501 CDS
T04128
Name
(RefSeq) histone-binding protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106417501
03083 Polycomb repressive complex
106417501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106417501
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106417501
Histone modification proteins
HAT complexes
HATB complex
106417501
HDAC complexes
Sin3A-HDAC complex
106417501
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106417501
PRC2.2
106417501
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106417501
Heterochromatin formation proteins
Other heterochromatin formation proteins
106417501
Chromatin remodeling factors
NuRD complex
106417501
NuRF complex
106417501
NuRF complex (fruit fly)
106417501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
NBCH_WD40
Beta-prop_HPS5
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
106417501
NCBI-ProteinID:
XP_013713749
LinkDB
All DBs
Position
A2:complement(4390505..4393274)
Genome browser
AA seq
416 aa
AA seq
DB search
MARDDEETQEEIKERLINEEYKTWKRNTPFLYDLVISHLLEWPSLTVEWLPDREEPSGKN
YSVQKMILGTHTHVNEANYLMLAQVQLPLADAEYNDERAKFGSATGKVQVIKKINHEGEM
NRARYMPQNPFMIATKTVRGEVYVFDYSKHPSKPALDGACNPDLRLRGHSSEGYGLSWST
LKQGHLLSGANDAQICLWDINASPKNKTLDAHQIFKAHEGAVEDVAWHLRHEYLFGSVGE
DQYFFIWDLRSPSASKPVQSVAAHSREVNCLAFNPLNEWIVATGSTDKTVKVFDLRRLSS
ALHSLDGHIEEVFQVGWSPKNESIVASSCLGRRIMVWDINKIDEEQTAEAAEDGPPELLF
THGGHTARISDFSWNPCDDWVISSVCEDNILQIWQMAETIYHGEDDAPGEEPLRGS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagacgacgaggagacgcaagaagagatcaaggagcgactgatcaacgaagag
tacaagacctggaagaggaacactcctttcctctacgatctcgtcatcagccacctcctt
gagtggccttcccttactgtcgagtggctccccgaccgcgaggagccttccgggaaaaac
tactccgttcagaagatgattctcggcacccacacccacgtgaacgaggctaattacctc
atgctggctcaggttcagcttccccttgccgacgccgagtacaacgatgagagggccaag
tttggttccgccaccggcaaggtgcaagttattaagaaaataaatcacgaaggggagatg
aaccgagctcgctacatgcctcagaaccctttcatgattgctaccaagacggttcgtggg
gaggtgtatgtgtttgattacagcaagcacccttctaagccagcgcttgatggtgcttgc
aaccctgatctgaggctcagaggtcacagctctgaagggtatggcctgtcttggagtacg
ctcaagcagggtcatttgctcagcggcgctaatgacgctcagatctgcttgtgggatatt
aacgcctctcctaagaacaagactcttgacgctcaccagatctttaaggctcatgaaggc
gctgtggaagatgttgcatggcatctgaggcatgaatacctgtttggatccgttggagag
gatcagtatttttttatatgggatctgcgttctccgtctgccagtaaaccagtacagtct
gtggctgctcactccagggaggttaactgcttagccttcaatccacttaatgagtggatt
gtggcaacagggtcaactgataagactgttaaagtattcgatctacggaggctaagcagt
gctcttcactcacttgatggccatatagaggaggttttccaagttggttggagcccgaag
aacgagtctatcgtagcctcaagttgcctcggtagaagaattatggtttgggatattaac
aagattgatgaggagcagacagcagaggctgcggaggacggcccaccagagctgctgttt
acacatggtggtcacaccgccagaatttcagatttctcatggaacccttgtgacgattgg
gtaatttccagtgtatgtgaggacaacatactccaaatatggcaaatggctgagaccata
tatcatggtgaggatgatgctccaggggaagaaccattaagaggttcctag
DBGET
integrated database retrieval system
