Brassica napus (rape): 106417676
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Entry
106417676 CDS
T04128
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106417676
Enzymes [BR:
bna01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
106417676
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106417676
Prokaryotic type
106417676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
106417676
NCBI-ProteinID:
XP_048621363
LinkDB
All DBs
Position
C8:47951705..47954490
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AA seq
316 aa
AA seq
DB search
MNPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEAFRKFVGQPVKIFCSSRTDAGVH
ALSNVCHIDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRNDGDVMVTDVRSVPSNYHAR
YKARERTYFYRLLSGSDPLSILEKDRAWHVPEELDLLSMQEACRVLVGSHDFTSFRAAGC
QAKSPVRCLDEFNVIEVPSTPYFPSIMERAESKLNNGDDPLTYPSQTKTETASVTTNFGE
TFGIGRRHRCYVVTACARGFLYHQVRLLVGALKCVGTGELTVSDIERILEAKTVSAAKPM
APASGLYLARVKYELP
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctagagtgcagcgttacttggttgcaatcgagtatatcggaactcgtttctcg
gggtcacaacagcaggcgaaggaccgcaccgtcgtcggcgtattgcaggaggcttttcgt
aagtttgttgggcagcctgtcaagatcttctgctcgagtcgaacggatgcaggagtgcat
gcactatcgaatgtttgccatatcgatgtggaacgcatcagtaaaagaaagcctggtgaa
gtgttaccacctcatgaacctggtgtggtccagagagctgtgaaccatttcttacagaga
aatgacggtgatgttatggtgactgatgttcggagtgtcccaagtaattatcatgccaga
tacaaggcccgggagcgcacgtacttttaccgattgctctcggggtcggatcctttatcc
attcttgaaaaagaccgtgcctggcatgttcctgaggagctagatcttctctctatgcag
gaagcatgcagagttcttgttggatcccatgattttacctccttcagggcagctggttgc
caggcaaagtcacctgtgagatgtttagatgaattcaatgtcattgaagtaccatcaaca
ccatattttccatctatcatggaaagggcggagagtaaactaaacaatggagatgatcct
ctcacatatcccagccaaaccaagacggagactgctagtgttactacaaatttcggcgag
acttttggtataggaagaagacaccgctgctacgtggtaacagcgtgtgcccgtggtttt
ctataccaccaggttcgactgcttgtaggagcattgaaatgtgtaggcactggagagtta
accgtctcagacattgaacgaatcctggaggcgaagactgtgtctgcagctaaacccatg
gctcctgcatctggtctgtatctggcccgtgtcaaatatgaacttccatga
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