Brassica napus (rape): 106418016
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Entry
106418016 CDS
T04128
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106418016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106418016
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106418016
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
106418016
NCBI-ProteinID:
XP_013714161
UniProt:
A0A078FA57
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Position
C9:58249122..58253800
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AA seq
714 aa
AA seq
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MNKIRSLRFLLPETITSAASNRGSVAVHYGSQVLPWRHQILDPDSSIVTYWNHVFLVTSI
LALFLDPFYFYAPYVGGPACLSVDVGLAATVTFFRSVADLFHLLHIFMKFRTAFVARSSR
VFGRGELVRDPREIAMKYLKSDFIVDVAAMLPLPQLVIWLVIPAATNGTANHANSTLALI
VLVQYIPRSFIIFPLNQRIIKTTGFIAKTAWAGAAYNLLLYILASHVLGAMWYLSSIGRQ
FSCWSKVCEKDHALRVLDCLPSFLDCKSLQQPERQYWQNVTQVLSHCDATSSTTNFKFGM
FAEAFTTQVATTDFVSKYLYCLWWGLRNLSSYGQNITTSVYLGETLFCITICIFGLILFT
LLIGNMQTSLQSMSVRVEEWRVKRRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDE
ESILQSLPTDLRREIQRHLCLALVRRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREG
DPVDEMLFVIRGQIESSTTNGGRSGFFNSTTLRPGDFCGEELLTWALMPNSTLNFPSSTR
SVRALSEVEAFALSAEDLKFVAHQFKRLQSKKLQHAFRYYSHQWRAWGACFVQSAWRRYK
RRKLAKELSLHESSGYYYRDETGYNEEGDEENYYGSDDDNFEGERLSVDNTNNSQNLGAT
MLASKFAANTRRGTNQKASSSSSTGKKDGSSNSLKMPQLFKPDEPDFSMDKEDV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatccgatctctccgcttcctcctccccgagaccataacctccgccgcatct
aaccgaggatctgtcgccgtacactacggcagccaagtccttccatggcggcatcagatc
ctggacccggacagcagcatcgtcacctactggaaccacgtcttcctcgtcacctccatc
ctcgccctcttcctcgatcctttctatttctacgctccttacgtcggcggccccgcgtgt
ctctccgtcgacgtcggcctcgccgcgacggtcacgttcttccgctcggtggccgatctc
ttccacctcttgcacattttcatgaaattcagaacggccttcgtcgcgcggagctctaga
gtttttggacgcggtgagctcgttagggatccgagagagatcgctatgaagtacttgaag
agcgatttcatcgtcgatgttgccgccatgcttcctcttcctcagcttgtaatttggcta
gtaattccagccgcaaccaacgggactgctaatcatgccaatagcacgctcgcccttatc
gttctcgtccaatacattccaagatcattcatcatattcccacttaaccaaaggattata
aaaacaaccgggttcatcgccaagactgcttgggcaggagctgcatacaacctcctcctc
tacatccttgctagtcacgtgttgggagcaatgtggtatctatcatcaattgggcggcag
ttctcgtgctggtccaaagtatgcgagaaagatcacgccctgagagttttggattgtctt
cctagcttcttggactgcaagagtctacagcaacctgagcgacagtattggcagaatgtt
actcaggttctttctcattgtgatgctacgagcagcactactaacttcaagtttggcatg
ttcgctgaagcctttaccactcaagtcgctactacggattttgtgtcaaagtacttatat
tgtctttggtggggtttgagaaatctaagttcttacggccagaatataaccacaagtgta
tatcttggcgagaccttgttctgtattacaatctgtatttttgggttgattctcttcaca
ctcctgatcggtaacatgcaaacatcattacaatcaatgtctgtaagagttgaggaatgg
agagttaagagacgagacaccgaagaatggatgagacatcgtcaactacctccagagctt
caagaacgtgtccgaagattcgttcaatacaaatggcttgcaactagaggcgtcgatgaa
gagtcaattctccagtctttacctactgacttacgccgtgaaatccaacgccatctctgt
cttgctcttgtccgcagggtcccgttcttctcacaaatggatgatcaacttcttgacgct
atatgcggatgtcttgtctcatctttaagcacggcagggacctacatattccgtgaaggt
gatccggtggatgagatgctctttgtgattagaggacaaatagagagctcaactacaaac
ggaggaagatctggtttctttaactccactactctaagacctggtgatttctgtggagaa
gagcttcttacatgggccttgatgccaaactctacacttaattttccttcttcaacccgt
agcgtccgtgcactctctgaggttgaagcatttgccttaagcgcagaggatcttaagttt
gttgctcatcagttcaaacgtcttcaaagtaaaaaattacaacacgctttcaggtactac
tcacatcagtggcgagcatggggagcttgttttgtgcaatccgcatggagaagatacaag
cgacgaaagctcgctaaagagctcagcttgcacgagagtagcggatactattacagagat
gaaacaggatacaacgaagaaggcgacgaagaaaactactatggaagcgacgacgataat
ttcgaaggtgagagactgtctgtggacaacacaaacaacagccaaaaccttggagcaaca
atgttggcatctaagtttgcagcaaacacgagaagaggcacgaatcaaaaggcttcaagt
agtagtagtactggtaagaaagatggatcttcgaatagtttgaaaatgcctcaactattc
aaacctgatgagcctgatttctctatggataaagaagacgtttaa
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