Brassica napus (rape): 106418167
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Entry
106418167 CDS
T04128
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
bna04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106418167
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106418167
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106418167
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106418167
03036 Chromosome and associated proteins [BR:
bna03036
]
106418167
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106418167
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106418167
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106418167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
106418167
NCBI-ProteinID:
XP_048595970
LinkDB
All DBs
Position
A9:complement(13203486..13207961)
Genome browser
AA seq
531 aa
AA seq
DB search
MDIEEVHILDPELLQLPGLSVKSNPLIAEELFSHWLSLPDTSRLVKSLIDDTKSSTPVSI
SKNCANLNIACGSALPSLFLNSGTPPLSPRASSGSPRFSRQKTSPFSLQSPLRSLREPKP
QLIPQFYFQHGPPPAKELKEQCLSMVDHLFSDFIDGLRMNEFKTVTKEVCKLPSFLSSVL
FRKIDVDSTGIVTRDAFVKYWVDGHMLAMDLASQIYNILRQPGCEYLRQADFKPVLDELL
ASHPGLEFLRNTPEFQERYAETVIYRIFYYINRSGTGCITLRELKRGNLVAAMQQVDEED
DINKVIRYFSYEHFYVIYCRFWELDGDHDFLIDKENLLKYGNHALTYRIVDRIFSQVPRK
FTSKVEGKMSYEDFAYFILAEEDKSSEPSLEYWFKCIDLDGDGVISPNEMQFFYEEQLHR
MECITQEPVLFEDILCQIFDMIKPEKENCITLKDLKASKLSRNVFNILFNLNKFMAFETR
DPFLIRQERENPTLTEWDRFAQREYVRLSMEEDEVSNGSADVWDEPLESPF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggatatagaggaagttcatatattggatccagagctcttgcagcttcccggtttatcg
gttaaatcaaaccctcttatcgctgaggaactcttctcccactggctttccctccccgat
acttcccgattggtcaagtctttgattgacgatacgaaatctagtaccccagtcagtata
tccaagaactgtgccaatctcaacattgcttgcggaagtgccttgccatctctctttctc
aacagcggcactccccctctttcccctcgtgcctcttccggctctccccgtttctccagg
cagaagactagccctttctctctccagtcccctctcagatctctcagggaaccaaagccc
caactcatccctcagttctacttccaacatggccctcctcctgcaaaagaacttaaggag
cagtgtttatccatggttgatcatctttttagtgactttattgacgggcttcgtatgaat
gagttcaaaaccgttacgaaagaagtctgcaagctgccttcttttctttcttctgtactt
tttagaaagatagatgtggattccaccggtatcgttaccagggatgcatttgtcaagtac
tgggttgatggacatatgttggcaatggacttagcctcacagatatataatattttaagg
cagccaggctgcgagtacctcagacaggctgacttcaaaccagttcttgatgagctacta
gcatctcatcctggcttggaattcctgaggaatacacctgaatttcaagaaagatatgcg
gagacggtcatctacagaatattttactacataaacagatcgggaactggttgcattact
ttgagagagctgaagcgtggaaatcttgttgctgctatgcaacaagttgatgaagaagac
gacatcaataaagttattaggtacttttcctatgagcatttctacgtcatctactgcaga
ttttgggagctcgatggagaccatgatttccttatcgataaggaaaacctcctcaaatat
ggtaaccatgcccttacctacaggattgtcgacagaatattttcacaggtcccaaggaaa
tttactagcaaagttgaggggaagatgagttatgaagattttgcatacttcattctcgct
gaggaggataagtcatctgagcctagtcttgagtattggttcaagtgcatagacctggat
ggagatggggtgatcagtccaaacgaaatgcagtttttctatgaagagcagctgcatcgc
atggaatgcataacccaggaacctgtactcttcgaggatatcctatgccaaatattcgac
atgattaaacctgagaaggagaactgtatcacactcaaggatctgaaagcatcaaaactt
tctagaaatgttttcaacatactcttcaacctgaacaaattcatggcgtttgaaacccgt
gacccctttctcattcgccaggagcgggaaaatccaacattgacagaatgggaccggttt
gctcaaagagagtatgtgaggttatctatggaagaagatgaagtctcgaatgggagtgca
gatgtttgggatgaaccactcgaatctccattttaa
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