Brassica napus (rape): 106418384
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Entry
106418384 CDS
T04128
Name
(RefSeq) uncharacterized protein BNAC09G43050D
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106418384
Enzymes [BR:
bna01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
106418384
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106418384
Prokaryotic type
106418384
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
106418384
NCBI-ProteinID:
XP_013714534
UniProt:
A0A078F8Z9
LinkDB
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Position
C9:58542843..58545557
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AA seq
509 aa
AA seq
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MAKSLHFTRLMSSSAITALSSHFPFSIKPRIIHKPYFFSSTPYPLQYDMIINRPTQSSLS
QPRRRPQSPRAIESTSSPDPDFDSWVDNKLASEREKGRPGSGDPEMDKEKRKYYSKRRKR
LYGSDSEDEGGRKSDEGFVELKPEVVEFDRLHQREEELYFYDTFAYPWEKDKHYKMVYQL
EKKYFPDQGLDKAFLQPGESPSGKVTGKKKRDGGDAENCDDEKFVFFDEVKDKEKVEESV
TEKKVEQFFKGLTKSANERGVASGGGDGDGEPFLVTRNGELPPRWDGPNGTVLLVNKPKG
WTSFTVCGKLRRIVKVKKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMIKGYSGVFRL
GEATSTLDADSPVIQREPWEHIKDDDIKKALTSFLGEIWQVPPMFSAIKVGGEKMYDKAR
RGETVELSPRRISIFQFDIERSLDDRQNLIFRVVCSKGTYIRSLCADLAKALGSCAHLTA
LRRDSIGEYSANDAWEFNELEAAITKNYF
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatctctacacttcacaagactaatgtcatcatcagcaataacggctctctcc
tctcacttccccttctcaatcaaaccgagaatcatccataaaccctacttcttctcctca
actccgtacccactccaatacgacatgatcatcaaccgccccacacagtcctccctctcc
caaccccgccgccgcccccaatcccctcgagccatcgaatccacctcctcccccgacccg
gacttcgactcctgggtcgacaacaaactcgcctcggagcgcgaaaagggccgacccggt
tcgggagacccggagatggacaaggagaagaggaagtactacagcaagaggaggaagagg
ctgtacggatcagattccgaggacgaaggagggaggaaatcagatgaaggattcgtggag
ctgaagccagaggtggtggagttcgataggttgcatcagagggaggaggagttgtatttc
tacgacacgtttgcgtatccgtgggagaaggataagcattataagatggtgtatcagctg
gagaagaagtattttcctgatcagggcttggataaggctttcttgcagcctggagagtct
ccctccgggaaagttactgggaagaagaaaagggatggtggtgatgcggagaattgtgat
gatgagaagtttgtgttttttgatgaagtgaaggataaggagaaggtagaggagagtgtt
actgagaagaaagtggaacagtttttcaagggtttgacgaagtcagctaatgagagaggt
gtggctagtggtggtggtgatggtgatggagagccttttcttgtgacgaggaacggtgag
cttcctcctagatgggatggtcctaacggtacagtgcttttggtgaacaaacccaaagga
tggacttcattcaccgtctgtggtaagctacgacgaatagtcaaagtgaagaaggttggt
catgctgggacacttgatcctatggctactggtctcttaatcgtctgtgttggtaaagct
accaaggtggttgacagataccaagggatgatcaaaggttatagcggagtttttcgtctt
ggtgaagccacttcaactttagacgctgactctcctgtgattcaacgagagccttgggag
catattaaggacgatgacattaagaaagctttgacatcttttcttggcgagatatggcaa
gttcctccaatgttctcagctattaaagttggaggtgagaagatgtacgacaaggcgaga
agaggagaaaccgtggagctttctcccagacgaatttcgatttttcagtttgacatagaa
cgcagtttagatgacagacagaatctgatcttccgagttgtatgctccaagggtacatac
ataagatctctctgtgcagatcttgctaaagctcttggaagttgtgctcacctcactgct
ctccggcgagactcaatcggtgaatattctgctaacgatgcttgggagttcaatgagtta
gaagcagcaatcaccaaaaactacttctag
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