Brassica napus (rape): 106418398
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Entry
106418398 CDS
T04128
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106418398
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
106418398
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VP214_bundle
Motif
Other DBs
NCBI-GeneID:
106418398
NCBI-ProteinID:
XP_013714555
LinkDB
All DBs
AA seq
387 aa
AA seq
DB search
MSIVRIIFLFLLTTSSAFASAFPKPAPVPQWSTSETSNSTASCSATGNPIDDCWRCDKKW
KSNRKSLADCAVGFGRDSVGGRAGEFYTVTDSGDEDPLNPSPGTLRYAATQDQPLWIIFD
RDMVITLKEDIQVTSYKTIDGRGNNVQIAYGPCLSLYQVSNVIIHNIYIHHCVPAKRSLG
GYSDGDGISIFESRDVWIDHCTLEKCHDGLIDAVGGSTDITISNNYMLNHNEVMLLGHND
EFVGDRDMRVSIAFNYFGEGLVQRMPRCRHGFFHIVNNIYREWEMYAIGGSANPTIFSQG
NVFIASDNQFTKEVTKRESVDGDDEWKEWNWKSEGDEMLNGAFFTPSGNEDSPSYTKMSS
MVARPASLLKTTHPSVGVLSCQIDQPC
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtctattgtacgtataattttcttgtttctcttaaccacttcttccgcgtttgcgtct
gcgtttcctaaaccggcacccgtaccgcaatggtcaacatcagagacatcaaactcaaca
gcttcttgctcagcaactggaaatccaatcgatgactgctggagatgcgacaagaagtgg
aaatccaaccgcaagagcctcgcggactgcgcggttggattcggacgcgactcggtaggc
ggtagagcaggggagttctacaccgtgaccgattcaggagacgaggatcctctaaaccca
tctccaggtacattacgttacgccgcaacacaagaccaacctctatggatcatattcgat
agagacatggtaataacactaaaagaagatattcaagtgacttcatacaaaaccatagac
ggtagaggaaataacgtgcagatagcttatggaccgtgtttatctttgtatcaagtaagt
aacgtaatcatacacaatatttacatccaccattgtgtaccggcgaaacggtcgttggga
ggatattctgatggagatgggatctcgatattcgagtcacgagatgtttggattgatcat
tgtacgttagagaagtgtcacgatgggcttattgatgcggtgggtgggtcaacggatata
acgatatcgaataactacatgttgaatcataacgaagtcatgcttttaggtcataatgat
gagtttgtcggtgatcgtgatatgagggtttcgatcgcgtttaattattttggtgaagga
cttgtccagcgaatgcctaggtgcaggcatggattttttcacattgtgaataatatttat
agagagtgggagatgtatgcaattggtggaagtgctaatccaaccatttttagtcaagga
aatgttttcatagcttcggataatcaattcacaaaggaggttacaaagcgagagagtgta
gatggagacgatgaatggaaggaatggaattggaaatcagaaggagatgaaatgctaaac
ggtgctttctttacaccatcagggaacgaggattctcctagctatacaaaaatgtcgagt
atggtagctcggccagcttcacttcttaagactacacatccatcagtaggtgttcttagt
tgccaaattgaccaaccttgttag
DBGET
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