Brassica napus (rape): 106418451
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Entry
106418451 CDS
T04128
Name
(RefSeq) retinoblastoma-related protein 1-like isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106418451
Transcription factors [BR:
bna03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
106418451
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
106418451
NCBI-ProteinID:
XP_013714619
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All DBs
Position
C1:47450617..47455938
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AA seq
1017 aa
AA seq
DB search
MEEVQPPVTPPIDPNGKRSEATLFDLCEKVLSLEGSVCDEALKLFSETKRILSANMANIG
SGTREEVERFWFAFILYSVKMLLTVRKQVDGQSVSGDNGFNLCQILRALKLNIVDFFKEL
PQFVVKAGPVLCELYGADWENRLQAKELQANFVHLSLLSKYYKRGYREFFLTYDANAEMT
SANSASYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSVLAILIIHVPCRFRNFSI
QDSSRFVKKGDKDVDLVASLCKIYDASEDELRKIMEKANNLIETILKKKPSPASACKTDT
LDNINPDGLTYFEDLLDETSISTSLTTLEKDYDETVCNKGELDERVFINEEDSLLGSGSL
SAGAVNITGAKRKIDSLSSPARTFISPLSPHKSPAAAKTTVTATPVSTAMTTAKWLRTVI
CPLPPKPSPGLELFLKSCDRDITNDVTRRAHVILEAIFPNSSLGDQCAGGSLQPVNLMDD
IWAQQRRLEAVKLYYRVLEAMCKAEAQILHVNNLNSLLTNERFHRCMLACSAELVLATHK
SITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMVWERGSS
MYNSLIVAKAPLALEINRLGLLAEPMPSLDAIAALINFSEGSSNHVQKPEACPGQNGDIK
SPKRLCTDYRSILVERSSFASPVKDRLLALGNVKSKTLPPPLQSAFATPTRPNPGGGGET
CAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLFQRVLAQRTSLLFNRHIDQ
IILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVFVDSSQGRRQGRVGPDHVDI
ITFYNDVFIPAVKPLLVEIVPVKKDQAMEANTNPEGHCPGSPKVSVFPSVPDMSPKKVSA
VHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPSKDLSAINNRLNNSNNSSNRK
RTLKFDVEAGLVSDSMVGNSLSLQNQNQNETDASNQNQNGSDASSSGGAPFKTEPQD
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagttcagccaccagtgactccacccattgaccctaatgggaaaagaagtgaa
gctactctcttcgacttatgcgagaaagttctttcccttgaagggagcgtttgcgatgaa
gctttgaagttgttttcagaaaccaaacggatcttgtcagcaaacatggctaacattgga
agtggaacgcgggaggaagtggagaggttctggtttgcgttcattctctattcagtgaag
atgcttcttactgtgagaaaacaagtggacggacagtcagtgtctggtgataatgggttt
aatctgtgtcagatcctgagggctctgaagctaaatattgtggattttttcaaagaatta
cctcagtttgtggtcaaagctggtcctgtgctttgtgaactttatggtgctgactgggag
aacagacttcaggcaaaggagttgcaggcgaactttgtacatcttagccttctaagcaaa
tactacaagcgtgggtaccgggagttcttcttgacatacgatgcaaacgccgaaatgaca
tcagcaaactctgctagttacttgccggatagttaccgttttggatggttactctttcta
gcactccgaaaccatgcttttagtcgatttaaagaccttgtgacatgcactaatggccta
gtttctgtattggctattttgatcatacacgttccttgtcggtttagaaacttcagcatc
caagactcctcacgctttgttaagaaaggtgacaaagatgtagacttggttgcatcactt
tgcaagatatatgacgcctcagaagatgagttgaggaaaataatggagaaggcaaataat
ctgatagaaacaatactgaagaagaagccatctccagcatctgcatgcaaaactgacacg
ctagataatattaacccagatggattgacctactttgaggatttactggacgaaacatcc
atctcaactagcttgaccacactagaaaaagactacgatgaaacagtctgtaataaaggc
gagcttgatgagagggtgttcatcaacgaagaggatagcttacttggatccggaagctta
tctgcaggagctgtaaacatcaccggcgctaagaggaaaattgattctttgagctcaccc
gcgaggacatttataagtccgctctctcctcataagtcacccgccgcagctaagacaact
gttacagcaacaccagtgagcacagcgatgacaactgccaaatggctcagaaccgttata
tgtccgcttccgccaaagccttctcctggtttggagcttttcttgaaatcttgcgatagg
gatataacaaacgatgtcacaagaagagcgcatgtgatactggaagctatttttccgaac
agctctcttggggaccaatgcgcaggcgggagcttgcagcctgttaacctcatggacgac
atatgggcgcagcagcgaagattagaagctgtgaagctatactacagagtcctcgaggcc
atgtgtaaagccgaagctcagattctgcacgtgaacaacttgaactctttgctgacgaac
gagaggttccacagatgcatgctggcttgctcggcagagctggttctggctactcacaaa
agcataacgatgctgttcccggctgttctggagaggactgggatcacggcctttgatctc
agcaaggtgattgagagtttcatcaggcatgaggattctctgcctagagagctgagacgg
catctcaactcgctggaggagcggcttctggagagtatggtgtgggagagaggctcctcg
atgtacaactctctgatcgtcgccaaggcaccgcttgcgttggagattaaccggcttgga
ttgctagctgaaccgatgccgtctcttgatgctattgcagctcttattaacttctctgaa
ggttcatcaaatcatgtccaaaagcctgaagcatgtccaggacaaaatggagatattaaa
tcgcccaaaagactgtgtactgactaccgcagcattctagttgaacgcagttcctttgca
tcaccagtaaaggatcgtctgttggccttaggcaacgttaaatccaagacgctgccacct
ccgttgcagtctgcatttgctactcccacacggcctaacccaggaggcggaggagaaact
tgtgcagaaactggtatcaatatattcttcactaagattaataaattagctgcggttaga
atcaacggaatggtggaaaggctacaactttcgcagcaaataagagagagtgtataccgt
ctcttccaacgtgtgcttgctcagaggacttctcttttgtttaatcgccatattgaccag
atcattctctgttgcttttacggagtagccaagatatcccaaatgagcctgacgttcagg
gaaatcatatacaactataggaagcaaccacagtgcaagccactggttttccgcagcgtt
tttgtggattcgtcacagggtcgccgtcaagggagagtaggacctgatcatgttgacatc
atcacattctacaacgatgtatttatccccgctgtaaaaccgttgctggtggagatagtt
cctgtgaaaaaggaccaagccatggaggccaatactaatcctgaaggtcattgtcctgga
tcgccaaaggtgtctgtgtttccaagtgttccagacatgtcccctaagaaagtatcagct
gtgcataatgtttatgtttctccccttagagggtcaaagatggatgctcttatctcacac
agctcaaagagttactacgcttgtgttggagagagcacacatgcttaccagagcccttca
aaagacttatctgccatcaacaaccgcttgaacaacagcaacaacagcagcaaccgcaag
cggacgcttaagtttgacgtagaagcaggactggttagcgattccatggtaggaaacagt
ctatcccttcagaaccaaaaccaaaacgagaccgatgcttcaaatcaaaaccaaaatgga
agtgatgcgtcgtcttcaggtggtgccccctttaaaaccgagccacaagattga
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