Brassica napus (rape): 106418467
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Entry
106418467 CDS
T04128
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106418467
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106418467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
106418467
NCBI-ProteinID:
XP_048624478
LinkDB
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Position
C9:24599987..24604092
Genome browser
AA seq
765 aa
AA seq
DB search
MKRDFDEISEEEWQQHSFNPSRVLKQPRAPKTTTTRTPPPRRQQPNPSPPIESFAYRRPS
KAIESDEDCVVVEDSGSGESDSDVKIVNGGDDLLLDDEEEEEEAKVVVVRRARVGRRFVI
EDEEGSEEDEVEVEVEEVSSSEGEDGGGGDGDEDVVGKALQKCAKISADLRKELYGSSSG
VTTCDRYSEVESSTVRIVTQTDIDEACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIEGA
ILADEMGLGKTIQAITYLTLLNHLNNDPGPHLVVCPASVLENWERELRKWCPSFNVLQYH
GAARAAYSRELNSLSKAGKLPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEA
HALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVDLKK
LLNAEDTELITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVHMEKKQEDTYKEAIEDY
RAASQARVLKLSSKSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHP
IGAFGFECSLERVIEEVKSYNDFRIHQLLLQYGVNNTKGTLSDKHVMLSAKCRTLAELLP
SMKKSGNRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFA
CLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVD
ENIYEIAKRKLVLDAAVLESGVHVDDDGDTPEKTMGEILASLLMA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgatttcgacgaaatctccgaggaggagtggcagcagcactcgttcaaccct
tcgcgagttctcaaacagccacgtgctcccaagacaacgacgacgaggactcctcctcct
cgtcgtcagcagccgaatccgtcgcctccgattgagtctttcgcctacaggaggccgtcg
aaggcgattgagagcgatgaagactgtgtcgtggtggaggattcaggttcaggagaatcg
gattcggatgtgaagattgtaaacggaggagatgatttgttgttggatgatgaggaggaa
gaggaagaggccaaggttgtggtggtgcgacgtgcgcgagttggtaggaggtttgtgatt
gaagacgaggaagggagtgaggaggatgaggttgaggttgaggttgaggaggttagttct
agtgaaggtgaagatggtggtggaggagacggagatgaggatgtggttggtaaggcgttg
cagaagtgtgctaagatctcagcggatcttaggaaggagctttatggtagctcttctggg
gttactacttgtgataggtactctgaagtggagtcttctactgtgaggattgtcactcag
actgatattgatgaagcttgtaaagcagaggattctgattttcagcctatactcaagccc
taccagttagttggtgttaatttccttcttctgttgtataagaagggaattgaaggagcc
attctagccgatgagatgggtcttggaaagactattcaggcaatcacatatttaaccctc
ctaaatcacttgaacaatgatcctggtcctcatttggttgtatgccctgcctctgtcctg
gaaaactgggagagagagctcagaaagtggtgtccatcatttaatgttcttcagtatcac
ggggctgcgagagccgcctactctagagaattgaattctctgtcaaaagctgggaagctg
ccaccattcaatgtacttcttgtgtgttattctttgtttgagcggcatagtgaacaacag
aaagatgaccggaaggtattgaaacggtggcgttggagctgtgttttgatggatgaagcc
catgctttaaaggataagaacagttataggtggaaaaacctgatgtctgtggccagaaac
gctaaccagcgtcttatgcttacaggaacgcctcttcaaaatgatttgcatgaactatgg
tcgctgctggagttcatgttgcctgatatatttactacagaaaatgttgacttgaagaag
ctgttgaacgcagaagataccgagttgattactcgaatgaaatctattcttggtcctttc
atcttgaggcgtttgaaatctgatgtcatgcagcaacttgttccaaagatacagcgggtt
gagtatgtccacatggagaaaaaacaggaagatacatataaagaagccatagaggactat
cgtgctgcttctcaagcacgggttttgaagctatcatccaaatccttagccaaagcactt
ccaaagcgtcagatttcaaactactttactcaatttcggaagattgcaaatcatccattg
ttaattaggagaatatacagcgatgaagatgtcattcgcatcgcgaggaagttacaccca
attggtgcatttggatttgagtgctccttggaaagagtcatcgaagaagtaaagagttac
aacgacttccgtatacaccagctactgctccaatatggagtcaacaataccaaaggaact
ctctcagacaaacatgttatgctctcagcaaaatgtcggacattagctgagcttcttcct
tcaatgaagaaatccggcaatcgtgttctaatattcagtcaatggacatcgatgctcgat
atcttggaatggacactcgatgttataggcgttacataccgaagacttgatggcagtact
caagtcacagatagacaaactatagtggacacattcaacaacgataagtcgatatttgct
tgtttgttgtcaactcgagcaggcggacaaggtctgaatttaacgggagcagatacagtg
attattcacgatatggattttaatccacagattgatcggcaagctgaagatcgatgccat
cgtatcggtcaaaccaaaccagtcactatcttcagactggtgacgaagtcaacggttgat
gagaacatctacgagatagcaaagcggaaacttgtacttgatgcggcggttctagagtcg
ggagttcatgtagatgacgacggagacacgcctgagaaaaccatgggagagattctcgct
tctcttctcatggcataa
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