Brassica napus (rape): 106418508
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Entry
106418508 CDS
T04128
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106418508
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106418508
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
106418508
NCBI-ProteinID:
XP_048624475
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Position
C9:complement(24558343..24562117)
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AA seq
499 aa
AA seq
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MASSSYNASVVPSSSSSAQPFFLTGSGVGENDFGQKDTFVSMIQQPNSSAPPPKKRRNQP
GNPNPDAEVVALSPKTIMATNRFICDVCKKGFQREQNLQLHRRGHNLPWKLKQKSTKEVK
RKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKT
CGTKEYRCDCGTIFSRRDSYITHRAFCDALIQETARNPTLSFTSMEAASSGAGSGGLYGR
LDGGRTLSHHHLSGHPNSGFSPLAGYNLNIASSENSRHFVPQTSNPNFLIQSSQGMLTVP
NNNDQSFMNHQGLNQFDPVNNINSKSSTNNSFFNLGFFQENIKNSETSLPSLYSSDVLVH
HPEESLNVGSNVSATALLQKATQMGSITSNDPSALLRGLASSSSNDFGGGQIMGNDNNGN
LQGLMNSLVAVNGGGAGGSGGNIFDVHFGNNGNMSGSDKLTLDFLGVGGMVRNVNRGRGR
GGDVGELKFSEQNHPFGRS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcatcatataacgcaagcgttgttccttcatcatcatcctctgctcagccg
ttcttcctcactggctccggcgtcggagagaacgactttggccagaaagatacttttgtg
tcaatgattcaacagcctaactcctcagctccaccacccaagaaacgaagaaaccaaccc
ggaaacccaaatcctgatgcggaagtggtagctttatctccaaagacaataatggctaca
aacaggttcatatgcgatgtatgcaagaaagggtttcaaagagaacaaaacctacagctt
caccgaagaggacacaatctcccatggaaactcaaacagaagtcaaccaaagaagtaaag
aggaaagtctatctttgtccggaacccacgtgcgtccaccatgacccctcacgtgctctc
ggagacctcaccggaattaagaagcactattaccgtaaacatggagaaaagaagtggaag
tgcgataaatgttctaagcgttacgctgttcaatcggattggaaagctcactctaagacc
tgtggtactaaagagtatcgatgtgactgtggtaccatcttctctagacgcgatagttac
attacacacagggctttctgtgatgcattgatacaagagactgctagaaaccctaccttg
agcttcacgtcaatggaagctgctagcagcggcgccggctccggtggattgtacgggaga
ctggatggtggcaggactctatcccaccaccatttgagtggccatccaaactctggattt
tcgcctctcgcgggttacaatctaaacattgcatcttctgaaaatagcagacactttgtt
ccgcagacgtcaaaccctaacttcttaatccaatcgagccaaggaatgctgactgtaccg
aacaacaacgatcagagtttcatgaaccatcaaggtctaaaccagtttgatccggtcaac
aacataaactccaaaagtagcaccaacaacagcttcttcaacctcggattctttcaagaa
aacatcaagaactcagagacgagtcttccttctctatatagctccgacgttcttgttcat
caccctgaagaaagcttgaacgtgggttctaacgtgtcagccacggcactgcttcagaaa
gctactcaaatgggttccatcacaagcaacgatccttctgctttactcagaggcttagct
tcttcgtcaagtaatgattttggaggagggcagattatggggaacgataataacggtaat
cttcaaggtctaatgaactcactagtggcagtaaatggcggtggtgccggcggatccggt
ggcaatatattcgatgttcatttcggaaacaatggaaatatgagcggctcggacaagtta
acgttagattttcttggagttggaggaatggttagaaatgtaaatcgcggccgtggtcgt
ggaggcgacgttggtgaactgaagttttcggagcaaaatcatccatttggaagatcttga
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