Brassica napus (rape): 106418543
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Entry
106418543 CDS
T04128
Name
(RefSeq) E3 ubiquitin ligase PQT3-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106418543
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106418543
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
U-box type E3
106418543
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
106418543
NCBI-ProteinID:
XP_013714718
UniProt:
A0A078GLC7
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Position
C9:complement(23573130..23578824)
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AA seq
875 aa
AA seq
DB search
MAIYYKFKSARDYDTIAMDGPFISVGILKDKIFETKHLGSGKDLDIVLSNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRITVITAQEPRIENKVEHVQAEASNSHVAEPSAAKYPEDEF
DEFGNDFYSIPAVQVAHHNNPCPVLAPTEEKVDEESKLQALIDTPALDWQRQGQDNFGAG
RGYGRGMNGRMGGRGFGMERKTPPPGYICHRCNVPGHLIQHCPTNGDPTYDVKRVKPPTG
IPKSMLVATPDGSYSLPSGAVAVLKPNEDAFEKEMEGLPSTTRSVGELPPELKCPLCKEV
MKDAALTSKCCFQSFCDKCIRDHIIAKSKCVCGETDVLADDLLPNKTLRDAINRILEAGN
DSIENAGSAGHITDLESARCLPPPKGRSPATSAASKGEKKPGHSNNNDAPTVKLPTEIAE
ITSAPRASAEDKTEKPVDACESTQGPAAVKEATVSKMNTQAPPKEEVQQQVAAGEPAKKK
KKKPRVPGTEMQQWNHVPDLAGPDYNMMQMGPGPGPGPQFFNGMQPAFNGFHPGFNGFPG
PFPGQMPPFMGYGINPMEMAFGRGMNMMHPDPFAAQGFGFPNIPPPHRDLAELGNRMNLQ
RAMMGRDEVEARKAEMLRKRENDRRTEGGKMFRDGENSRMMMNNGTSASASSINPNKSRQ
APPPPNTEYDRRRRPERLSPEHHPPTRKSKSPSRDSKRKYERYPEERDRQRDRERSSRHQ
DLDREHDHRTRDRRDEDRSRDHRHSHRDSERNQHRHRKRSEPPPSEPTAATKSEMEKSSV
FARISFPEEETSSKRRKVSSSSSASVAEPPVAVSTSMHRHSRKEIEVADYESSDEDRHFK
RKPSRYERSPPVVITDVSDDKHRYSKRGKGERSRA
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatattacaagtttaagagtgcaagggattacgataccatcgccatggatggc
ccctttatatcagttggtattctcaaagacaaaattttcgaaactaagcatttgggcagt
ggtaaagaccttgatattgtcctctccaatgcccaaactaacgaagagtatttggatgaa
gcgatgttaataccaaagaatacatctgttctaattcgtcgtgtcccaggacgccctcgc
atcacagttattactgcacaagagcctagaatcgagaataaagtggaacatgttcaggct
gaagctagcaattctcatgttgctgaaccatctgcagcaaaatatcctgaagatgagttt
gacgagttcgggaatgatttttactccatacctgctgtccaagttgcacaccataacaat
ccatgtcctgttcttgcaccaacagaggagaaagtagatgaagaaagcaaacttcaggcg
ttaattgacacaccagcacttgactggcagagacaaggtcaagataattttggggccggg
agaggttatggaaggggtatgaatggaaggatgggtggacgtggttttggaatggaaagg
aaaacaccacctccgggatatatttgccatcgttgcaatgtccctggacatttaattcag
cattgccccacaaatggtgaccctacctacgatgttaagcgagtcaaaccacctactggt
atccccaagtccatgttggtggcaacccctgatggctcttactcgctgccaagtggcgca
gttgcagttcttaaaccaaatgaggatgcttttgagaaggaaatggagggattgccgtca
acgacacgctctgtaggagaacttccgcccgagctaaagtgtccgctatgcaaagaagta
atgaaagatgctgcacttacaagcaaatgttgtttccagagcttctgtgacaagtgtatc
agagatcacattattgcaaagtcgaagtgtgtctgtggagaaactgatgtacttgctgac
gatcttctaccaaacaagacgctaagggatgccataaaccgtattttggaagccggaaac
gatagcattgagaatgccggcagcgcgggccatatcacagatttggagtctgcacgctgt
cttcctcctcccaagggtcgatctcctgctacatctgctgcatctaaaggcgagaagaaa
ccaggtcatagtaataacaacgatgcgccaacagtaaaactgccaacggaaattgcagag
atcacaagtgcccctcgggcatctgcagaagataaaacggaaaagccagtggatgcgtgt
gaaagcactcaagggcccgctgctgtgaaagaagcaacagtctcaaagatgaatacgcaa
gctcctcccaaggaagaagtgcagcaacaggttgctgctggagagccagcaaaaaagaag
aagaagaaacccagagttcctggaaccgagatgcaacaatggaatcatgtgccggatcta
gcaggccctgactacaatatgatgcaaatgggtccgggtccaggtccaggtccccagttc
ttcaacggcatgcaacctgccttcaacggctttcatcccggcttcaatgggtttccaggc
ccttttccgggccagatgcctccatttatggggtacggaataaacccgatggagatggca
tttggtaggggtatgaatatgatgcatccagatccatttgctgcacagggatttggattc
cctaacataccaccacctcacagggacttggcggagttgggaaaccgtatgaatctccaa
cgtgccatgatgggaagagacgaagtcgaagcccgaaaagctgagatgctaaggaaacgg
gaaaacgatagacgaaccgaaggtgggaagatgtttagagatggagagaatagcagaatg
atgatgaacaatgggacttcagcgtctgcatcatccatcaaccctaataaatctcgacaa
gcacctccgccgccgaatacggagtacgaccgacgcagacggccggagagattgtctccc
gagcatcatccgccgacgcgtaagtcaaagtctccgtctcgcgattccaagagaaaatac
gaacgctatcccgaggaacgtgatcgtcaacgcgaccgtgaaaggtcgtcccgtcaccag
gacctagatcgtgaacacgaccaccgcactcgcgaccgtcgcgatgaagacagaagccga
gaccaccgtcacagccaccgagattcggaacgcaaccaacatcgccaccgtaaacgatcg
gaacctccgccgtcggagccaacagctgcaactaaatccgagatggaaaagtcaagcgtg
ttcgctcggataagctttccggaggaagaaacttccagcaaacgaagaaaggtgtcttcg
tcttcttctgcttccgtggcggagccgcctgtcgccgtcagtacatcaatgcaccgtcac
agtcgtaaggagattgaggtagcagattacgagtcgagcgacgaagataggcatttcaag
aggaagccatcgaggtacgagcgatctccaccagtggtgattactgatgtgagtgatgat
aagcatcgatactcgaaacgcggcaagggagagagatctcgagcttag
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