Brassica napus (rape): 106418707
Help
Entry
106418707 CDS
T04128
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106418707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106418707
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106418707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_VPS8
CFAP43_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
106418707
NCBI-ProteinID:
XP_048598276
LinkDB
All DBs
Position
A10:complement(15930580..15932521)
Genome browser
AA seq
525 aa
AA seq
DB search
MSTLSQNAPTSKARREETEDDVRAKRRKMEEEKQRESEQVEMKKLENLLFGSLYNPVSFG
EREADVEGSDLFRVDRSAVRQAPDSEDDDDDDDDEQVSDDERVIRKGEAAWEDEEEKEIN
INIASVNRLRKLRKEEDEGLISGSEYIARLRAHHAKLNPGTEWARTDSQITDGDSSDDGG
DNDDDDILRTNEDLVVKSGGSKLCSGLLEYSKQADANIADHSDAPINSVQFHQNAQLLLT
AGNDRRLRFFQIDGTRNTKIQSIFLEDCPIHKAAFLPNGSQVIVSGRRKYFYSFDLENAK
FDKIGPLVGREEKSLESFEVSQDSKTVAFMGNGGYILLVSTKTKELTGTLKMNGSVRSLA
FSDDGKQLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSPNGALFASGTDRGIV
NIYKKAEFLGGKRKPIKTVDNLTSEIDFMKFNHDGQILAIISRMNKDSVKLVHVPSLTVF
SNWPPPKQNMEYPRCLDFSPGSGFMAMGNAVGKVLLYKLNHYMNA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgttatctcagaacgctccgacgagcaaggctagaagagaagagaccgaagat
gacgtaagggccaagagaaggaagatggaggaagagaagcaaagagagtctgagcaggtt
gaaatgaagaagcttgagaatctgttgtttggatcactctacaaccctgtttcatttggt
gagagagaagcagatgtggaaggatctgatttgtttcgtgtagatcgttctgctgtaagg
caagccccagattctgaagatgatgatgatgatgatgatgatgagcaagtttctgacgat
gagagagttattaggaagggagaagctgcttgggaggatgaagaagagaaagagattaat
attaacatagctagtgttaaccgtctgaggaagctgaggaaagaggaggatgagggttta
atctctggttctgagtacattgctaggttgagagctcatcacgctaagcttaaccctgga
acagaatgggcgaggactgattctcaaatcactgatggagattcctcagatgatggtggt
gataatgatgatgatgatatactcagaacaaacgaagatcttgtggtgaagtccggtggc
tccaagctgtgttctggtcttcttgagtattcaaaacaagcggatgccaacatagcagat
cattcagacgctccgattaactccgtccagttccatcaaaacgctcagctgcttctcacg
gccggaaacgatagaaggctgaggtttttccagatcgatgggacgaggaacacaaagata
cagagcatctttctcgaggactgtcccattcacaaagcggccttcttgcccaacggctct
caggtgattgtctcggggaggaggaagtacttttacagctttgatttggagaatgcgaag
tttgacaagattggtccattggttggtagagaggagaagagcttggagagtttcgaagtg
tcgcaagactccaagaccgtagccttcatgggaaacggaggttacatcttgcttgtgtcc
acaaagaccaaagagctgacgggaacgttgaagatgaacggttcagtgaggtctttggcg
ttcagcgacgatgggaagcagctgctgagctcaggaggggacgggcaagtctacgtatgg
gatctgagaacgatgaagtgtttatacaaaggtgtggatgaaggcagcacgtgcgggact
tcgctttgcagctcaccgaacggagctttgtttgcctctgggactgatagagggatcgtg
aacatctacaagaaggctgagttcttgggaggcaagaggaagccgataaagacggtggac
aatctcacttcagagattgatttcatgaagttcaatcatgatggtcagattctagctata
atctcgaggatgaataaagacagtgtgaagcttgtccatgttccgtcactaaccgtcttc
tcaaactggccaccgccaaagcaaaatatggagtaccctcgctgcttggacttcagccct
ggaagtggtttcatggctatgggaaacgctgtaggaaaagttttgctttacaaactgaat
cattacatgaatgcttga
DBGET
integrated database retrieval system
