Brassica napus (rape): 106418711
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Entry
106418711 CDS
T04128
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106418711
Spliceosome [BR:
bna03041
]
Common components
Common spliceosomal components
General mRNP proteins
106418711
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106418711
NCBI-ProteinID:
XP_048603550
LinkDB
All DBs
Position
A2:complement(694927..698487)
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AA seq
537 aa
AA seq
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MEFDEYEYLEKTVEEGDASADRKKEGSGNGNGNEKSERSYRKREGERRDEGERESSRSKK
SRGEEEENGGGRRDREKERHRSSRDKDRERSSKERDRSDREKSRDRERGGSRDRERDRSD
GEKSRDRERREREKDRERRQRERRSSSRSRREEREREVVERGSRRHRDKKDEPEADPERD
QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI
AMSGQLFLGQPVMVKPSEAEKNLAQSTTTAGGGTGPVDRKLYVGNLHFNMTELQLRQIFE
PFGPVELVQLPCDLETGQCKGFGFIQFAQVEHSKAAQIALNGKLEIAGRTIKVSSVADHI
GTQDGNPKSADFDDDDGGGLALNAQSRVLLMQKLDRTGLAASIGVPSLNGTAINQPGMNP
GFPTSVLPTTALPSVVTEPIGQPSECLLLKNMFDPATETELNFDEDIKEDVGDECSKYGE
VKDIYVDKNSAGFVYLRFESVQAAMAAQRAMHTRWFAQKMISATFLPPHEYEARAKP
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgagtacgagtacctggagaagacggtggaggaaggagatgcatcggcg
gataggaagaaggaaggtagcgggaacgggaacgggaacgagaagagcgagaggagttac
aggaagagagaaggagagaggcgcgacgaaggagagcgagagagcagtcggagtaagaag
tctcgtggagaggaagaagagaacggtggaggtaggagggatcgggagaaggagaggcac
aggagcagccgagacaaggatagagagaggagtagcaaagagagggacaggagcgatagg
gagaagagccgagacagagagaggggagggtcgagagacagagagagagataggagcgat
ggggagaagagcagagacagagagaggagagagagggagaaggatagagagaggaggcag
agggagaggagaagcagcagtaggtcaaggagggaggagagggaacgggaagtagttgaa
agaggaagcaggagacacagggacaagaaagatgagcctgaagctgatccagagagggat
caaagaactgtctttgcatatcagatgcctcttaaagctaccgagagagatgtttatgag
ttcttctccaaagctggcaaggtcagggatgtgcgactgatcatggacagaaactcaaga
cgatctaaaggagtcgggtatatcgagttttatgatgtgatgtcagtcccaatggccata
gctatgtctggacagctatttcttggacaacctgtgatggttaagccctctgaagctgaa
aagaatttggctcaatccactactactgcaggtggtggtactggtcctgttgataggaag
ctgtatgtgggaaacttgcatttcaacatgacagagttgcagcttagacagatttttgag
ccgtttggtcctgttgagcttgttcagcttccttgtgacctcgagactgggcagtgcaag
ggttttggattcattcagtttgcgcaagttgaacattcaaaggcagcacagatagcctta
aacggaaaattggagattgctggaaggacaatcaaggtttcctctgtagctgatcatatt
ggcacacaagacggtaatccaaaatcagctgattttgatgatgatgatggaggaggcctg
gctttaaatgcacaatcgagggtcctacttatgcagaagctggatcgtacaggtctcgca
gcaagtattggagtaccatcgctaaatggaacagctattaatcaaccaggcatgaatcct
ggtttccccacatcagtgcttccgacaacagcactcccttctgttgtcacagagcctatt
ggtcagccaagtgaatgccttctactgaagaatatgtttgatcctgcaactgagacggaa
ctgaattttgatgaagacattaaagaagacgttggcgatgaatgctccaagtatggcgaa
gtcaaggatatttatgtagacaagaacagcgcaggttttgtgtatctgcggtttgaatca
gtgcaggcggcaatggcagctcaaagagccatgcacacgagatggtttgcgcaaaagatg
atatctgcaactttcttgcctccacatgaatatgaagccagagccaagccttga
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