Brassica napus (rape): 106418960
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Entry
106418960 CDS
T04128
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase-like
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106418960
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
106418960
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106418960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
MetW
Ubie_methyltran
Methyltransf_8
DUF2226
Methyltransf_9
Methyltransf_4
Motif
Other DBs
NCBI-GeneID:
106418960
NCBI-ProteinID:
XP_013715147
UniProt:
A0A078HYT5
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Position
A8:complement(6909030..6910820)
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AA seq
353 aa
AA seq
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MRDVKVKANSKSTEEEENEMSSSLSVKSTPEIEKKYVHRVYDAIAPHFSSTRFAKWPKVA
AFLESLPSGSVVLDAGCGNGKYLGLNPSCFFIGCDISNPLIKICSDKGQEVLVADAVNLP
YREEFGDAAISIAVLHHLSTENRRKSAIEELVRVVKPGGFVLITVWAAEQEDKSLLTKWT
PLSPKYVEEWVGPGSPMNSPRVRNNPFFGLESIPETDVSAKDQKAGLESIPETEESTREP
KATQDSLGEQKDKSSVEVLLEALKMNQQEYFVPWHLPYHRAEVSGASASALASGLAKKDD
RKGTVVYNRYYHVFSEGELERLASGVGNAIIVDRFYDKSNWCIVLQKEALNQD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagagacgtcaaagtgaaagctaattctaagtcaactgaagaagaagaaaatgagatg
tcttcgtcattgagcgttaaatccacaccggagatcgagaagaagtatgttcatcgagtg
tacgacgctattgctccacatttcagctcgacaaggtttgctaagtggcctaaggtcgct
gcctttctcgagtcgttgccttcaggatctgtggttcttgatgcaggttgcggaaacggc
aagtatctggggttaaacccgagctgtttctttataggatgcgacataagtaacccactt
atcaaaatctgctcggataaagggcaagaggttctcgttgcagacgctgtcaatcttcct
tacagagaggagtttggcgatgcagccatctccattgcggttttgcatcacttgagcacc
gagaacagaaggaagagtgccattgaggaactggttcgggtcgttaagcctggtgggttc
gttctcatcacggtttgggcggcagagcaggaagacaaatctttgctcactaaatggaca
ccattgtctccaaagtatgttgaggaatgggtcggaccaggtagtccaatgaacagccct
cgtgtaaggaacaacccgttcttcggtcttgagagcattccggagactgacgtgagtgca
aaggatcaaaaggctggtcttgagagcattccagagaccgaggagagcacgagagagcca
aaggcgacccaagatagcttgggcgagcaaaaggataagagctctgttgaagtgttattg
gaggctctcaagatgaatcagcaagagtactttgttccatggcatttaccttaccaccgt
gctgaagttagtggtgcatccgcttctgcacttgcaagtggccttgcaaagaaagacgat
agaaaaggaactgttgtgtacaacagatactaccacgttttcagtgaaggcgaacttgaa
aggttggcatctggagtaggcaatgcaattatagttgatagattttacgacaagtccaat
tggtgtattgttcttcagaaagaagctttaaaccaagattga
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