Brassica napus (rape): 106418989
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Entry
106418989 CDS
T04128
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2
KO
K12195
charged multivesicular body protein 6
Organism
bna
Brassica napus (rape)
Pathway
bna03250
Viral life cycle - HIV-1
bna04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106418989
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106418989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106418989
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106418989
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
106418989
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106418989
Exosomal proteins of other body fluids (saliva and urine)
106418989
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Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
TINF2_N
HAUS5
CesT_Tir_1
DUF1269
DUF7750
FUSC
IL34
Motif
Other DBs
NCBI-GeneID:
106418989
NCBI-ProteinID:
XP_013715183
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All DBs
Position
C9:complement(61335291..61337133)
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AA seq
219 aa
AA seq
DB search
MGNMFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL
ALKKKRTQQDLLKQVDQWVINVEQQLADIELTSKQKAVFESLKQGNSAIKAIQSEVNLDD
VQKLMDDTAEAKAYQDELSAILGEKLSEEDEEEILAEFDNLESQLNVEDMPEVPTTELVP
EEDEILDLPDVPTKQPLAPNATAEISSTKRKVLEEPLEA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggggaatatgttcgtgaagaaaccaaagatcacggaggttgatcgagcgatcctctct
ctcaaaacccaaaggcgcaagcttggtcaatatcagcaacagcttgagaaagtgattgaa
gccgaaaagcaagctgcgagggacttaatccgtgagaagaggaaagacagggctttgttg
gcattgaagaagaagcggacgcaacaagacttattgaagcaagtggatcagtgggtcatc
aatgtcgaacaacaactggcagatattgagctaacaagcaagcagaaggcagtctttgag
agcttaaagcaaggcaacagtgcgattaaggcgattcagagtgaagtcaaccttgatgat
gttcaaaagctaatggatgacactgccgaggccaaggcttatcaggatgagctgagtgcc
atattgggagagaaactatcggaagaagatgaagaagagatcttagcagaattcgacaac
ctcgaaagtcagctcaatgttgaagacatgcctgaggtgcctacaactgagctcgtgcct
gaagaagacgagatattggatctccctgatgtgccaacaaaacaacccctcgctcccaat
gctactgcagaaatctcttcaacaaagagaaaagtacttgaagaacctttggaagcttga
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