Brassica napus (rape): 106419194
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Entry
106419194 CDS
T04128
Name
(RefSeq) isochorismate synthase 2, chloroplastic
KO
K02552
menaquinone-specific isochorismate synthase [EC:
5.4.4.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna00130
Ubiquinone and other terpenoid-quinone biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01240
Biosynthesis of cofactors
Module
bna_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
106419194
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
106419194
Enzymes [BR:
bna01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
106419194
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GFIT
Motif
Pfam:
Chorismate_bind
FAM180
Motif
Other DBs
NCBI-GeneID:
106419194
NCBI-ProteinID:
XP_013715406
UniProt:
A0A078G1R4
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Position
C5:10375490..10379540
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AA seq
565 aa
AA seq
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MASLHCSSYFLGTNLTKQNSIAIFHSYSPTSFTKLASRVSHQRFLLCSLAMNGCEADHKE
PLGTVETRTLSTVTSPAIATEKLITAVCNLKTEPPSFSSGIIRLQVPIDQTIGAIDWLHA
QNDALPRSFFSCRRSDAGRQDLLQDLASENVNGSSDRNPVSVAGIGSAAFFRDLSPFSHD
HWRCIRRFLSSTSPLIRAYGGFRFDARGKIAVEWEQFGSFYFTVPQVEFVEFGDNSMLAA
TVAWDEEISWTLENAIEALQETMLQVSSGIKRGRRESLGVSVVSKNHVPSEGAYHPAVTS
ALEIIKAENSPLSKVVLARSTRIITDTDIDPIAWLARLQREGQDAYQFCLQPPGAPAFIG
NTPERLFHRKHLGVCSEALAATRPRGDSAVSDMEIERDLLTSPKDDLEFSIVREKIREQL
NAICDRVIVRPPKTVRKLARVQHLYSQLAGQLRREDDEFDILTALHPTPAVCGCPVDEAR
LLIKQIESFDRGMYAGPVGYFGGGESEFSVGIRSALVEKGLGALIYAGTGIVSGSDSSSE
WNELDLKISQFIKSLEHEPALQPIN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcttcactgttcatcttattttctgggcacaaatcttacaaaacaaaactcc
attgcgatcttccacagctactctccaacctcatttaccaagcttgcctctcgtgtctct
caccagaggttcctactctgctcgctggccatgaacgggtgtgaggctgaccataaagag
ccacttggcacggtagagacaagaactctatccacggttacgtcaccggctattgcgacg
gagaagctgataaccgccgtctgtaaccttaaaaccgaaccgccttcgttctcatccggt
atcatccgattacaggttcccattgaccagacaatcggagcaatagattggcttcatgcg
caaaatgatgctcttcctcgcagtttcttttcatgtcgtcgcagcgacgctggccgtcaa
gatcttctccaagacttggcgagcgagaatgtgaatggatcatctgatcgtaatccggtc
agtgttgctggaatcgggtctgctgcatttttccgtgatctgagcccattctctcatgat
cactggagatgtatccgaaggtttctgtcttcgacgtctcctttgattcgtgcgtacggt
ggatttcggtttgatgctagaggaaagatcgctgtcgaatgggaacagtttggctccttt
tatttcacagtgcctcaggtcgagtttgttgagtttggggacaactcaatgctggctgca
actgttgcttgggacgaggagatctcatggacgcttgaaaatgctattgaagcacttcag
gagactatgcttcaggtttcttctggaataaagagaggaaggagagaatctttaggagtt
tctgttgttagcaagaaccatgttcctagtgaaggagcctatcaccctgctgtaactagt
gctctggagattataaaggccgaaaattcacccctaagcaaggttgtgcttgcacgcagc
actagaatcattactgataccgatattgatcctattgcttggttagcacggttgcagcgt
gaaggacaagacgcgtatcaattctgtcttcagccaccaggtgcaccagcattcatagga
aacacgcctgagagactcttccacagaaaacatctaggtgtctgcagcgaggcgttggct
gcaaccaggcctagaggtgattcagcagtttcggatatggaaatagagcgtgacttacta
accagtcctaaagacgatcttgagttttccattgtgcgagagaaaataagagaacaacta
aatgctatatgtgacagagtaattgtgaggccccccaaaacagtgagaaagcttgcaaga
gtacaacacctatattctcagttggcagggcagctaagaagagaagatgatgagtttgac
atcttaactgctttgcatccaacgccagctgtttgcggatgtccagtagatgaagcaagg
cttttgattaagcaaattgagtcatttgatagaggaatgtatgctggacctgttggatat
tttggtggtggagagagtgaattttctgtaggcataagatctgctttagtcgagaagggt
cttggagcattgatctatgcaggaaccggaatagtttcaggaagcgattcatcctcggag
tggaacgagcttgatcttaagatctctcagttcattaaatcacttgaacatgaaccagct
ttgcagccgatcaactaa
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