Brassica napus (rape): 106419282
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Entry
106419282 CDS
T04128
Name
(RefSeq) alpha-L-arabinofuranosidase 2-like
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106419282
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
106419282
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GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
zf-CHCC
DUF3805
Motif
Other DBs
NCBI-GeneID:
106419282
NCBI-ProteinID:
XP_048598565
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Position
A10:18583787..18588594
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AA seq
662 aa
AA seq
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MMDRKWCSLTFLTSICLILFLLGSYAAYEHFRRVDAREDNEKHYVTLQVEASNATGRPIP
ETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSSIWPWSIIGDESTISVVTDRSS
CFERNKIALRMEVFCNSSGCPSEGVGVYNPGYWGMNIEEGKKYKVTLYVRSTGDIDVSVS
LTSSNGSLTLASEQIIALASEVSKWTKKEMLLEANGTDDGARLQLTTTKNGSIWFDQVSA
MPVDTYKGHGFRNDLFQMMVDLKPRFIRFPGGCYVEGDSLSNAFHWKETVGAWEERPGHF
GDVWNYWTDDGLGQFEFFQLAEDLGAAPIWVLNSGMSHNDQVETARIMPFVQEALDGIEF
ARGDANSTWGSVRAAMGHPTPFDLKYVAVGNEDCLQKYTYYKGNYLVFYNAIKKAYPDIK
IISNCDGSSQPLDHPADYYDFHVYKPSKELFSMSHKFDNTSRDGPKAFVSEYAAKSETDA
NKGNLLAALGEAGFLLGLEKNSDVVGMVSYAPLFLNTNDRRWLPDAIVFNSSHLYGTPSY
WVQQFFTESSGATLLSSTMEGNSSYVEASAISFQSNGSDYIQIKAVNFANVTVELKVKMT
GLDSSNTKASAKKKKVLTSASVMDENSFSNPEMITPQESLGVMPEGNLTFVLPPYSFSLF
DI
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaggaagtggtgttctctgacgtttctgacaagtatttgcctgatattattt
ctccttggctcttatgctgcttacgagcattttcgtcgtgttgatgctcgagaagacaac
gaaaaacattatgtgacactgcaagtagaagcttccaacgccacaggacgacccattcct
gaaaccctttttgggatcttctttgaggaaatcaatcatgctggagcaggtggactgtgg
gctgaacttgttagcaacagaggatttgaagctggtggacaaatcattccttccagtatc
tggccttggtccattattggagatgaatcaaccatatctgtagttacagaccgctcttca
tgttttgagcgcaacaaaattgcacttagaatggaagtgttttgtaacagcagtggttgt
ccatcagaaggagtcggggtttataacccgggttactggggcatgaacattgaagaagga
aagaaatacaaagtgaccctttatgtgcgttccactggggacatcgatgtgtctgtgtct
ttgacaagctcgaatggatcactaactcttgcatcagagcagattatagctttggcttct
gaggtttcaaaatggacaaagaaggaaatgcttttggaggcaaatggaacagatgatggc
gcaaggcttcaattgacaactaccaaaaatggttcaatctggtttgatcaagtctcagcc
atgcctgtggatacttataagggacatggttttaggaatgatcttttccaaatgatggtt
gatctaaaacctcgtttcatccgtttccctggtggttgttatgtggagggtgattcgtta
agcaacgcattccactggaaagaaaccgtgggagcttgggaagagaggcctggccacttt
ggtgatgtttggaactactggacagatgatggtcttggtcagtttgagttcttccaactg
gctgaagatctcggtgcagctccaatatgggtgcttaacagtggaatgagtcataatgat
caagttgaaaccgcacgtatcatgccgtttgttcaagaagcgctagatggtattgagttt
gctcgtggtgatgctaattcaacatggggatcagttcgagctgcaatgggacatccaacg
ccttttgaccttaaatatgttgcggtcgggaatgaagattgtttgcagaaatacacatac
tacaaaggaaactaccttgtgttctataatgctatcaagaaagcctatccggacatcaaa
atcatctccaactgcgatggatcgtctcaaccactcgatcaccccgctgattactatgat
tttcacgtttataaaccttccaaggagttgttttccatgtcccataagtttgacaataca
tcgcgtgatggtccaaaggctttcgttagtgaatacgctgcgaagagcgaaacagatgct
aataagggaaaccttctagccgctcttggtgaagcaggtttcctccttggtttggaaaag
aacagtgatgttgtaggaatggtaagctatgcacctctcttccttaacacaaacgacaga
aggtggttgccagatgctatagttttcaactcgtctcatttgtatggaacaccaagctat
tgggtccaacaattcttcacagagtcaagtggagcaactcttctcagctctactatggag
ggaaactcttcttatgttgaagcatctgccatatccttccaaagcaatggctctgattac
atacagattaaggctgttaactttgcaaacgtgacagtggagctgaaggtaaagatgact
ggattggactcgagcaacacgaaagcttctgcaaaaaagaagaaagtacttacatctgcc
agtgtgatggatgagaactccttctccaacccagagatgattacgccacaagaaagctta
ggggtaatgcccgaggggaacttgacttttgttcttcctccctactccttttcattattc
gacatttag
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