Brassica napus (rape): 106419370
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Entry
106419370 CDS
T04128
Name
(RefSeq) uncharacterized protein LOC106419370 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106419370
Membrane trafficking [BR:
bna04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106419370
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
106419370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
ANAPC4_WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
Synaptobrevin
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_HPS5
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
106419370
NCBI-ProteinID:
XP_013715598
UniProt:
A0A817BLW5
LinkDB
All DBs
Position
A10:complement(18445545..18452217)
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AA seq
1083 aa
AA seq
DB search
MFAKKLLQKASGAAQKPAPAPPPRGCLIAEDLDPHIVSHYGIPSTASLLAFDPIQCLLAV
GTLDGRIKVIGGDNIEAILSSPKQLPFKNLEFIENQGFLVSISNDNEIEVWDLDLRKTAS
SLLWESNITAFSILHGTGYMYVGDEYGMVSVVKYNADEGKLVQLPYYVPTDALAEAAGLS
SPIDYPVVGLLSQPSSRGTRLLIAFSNGLLFLWDASEDRVVLVRGNKDLPTEGKTANDSL
EASHDELSDLELDGKEISSLCWASADGSVLGVGYVDGDILFWDFSEGQKGKTSNHAVKLQ
LSSAEKRLPVIVMHWCLDVTRKNCGGKLFIYGGDIIGSDEVLTMLALDWSSGLGGLKCVG
RVDLTLSGSFADMVLSPIASSRQSGVFLFLLTNPGQLQAYDDTSLASLMSQKENNSSASP
LPYPMVVPTMDPRMTVAVFAALNVNDKPSLALSEIVVAAKSRTPRTPSGESAQWPLTGGV
PSHLDDYKLERLYIAGYQDGSVRIWDATYPCLSLIYDLKPNANGIDITGVDASVTAISFC
PKTSCLAVGNESGMVRLFKLIGHKSGGTLEVVTNTDKKAHHLHQEDGPQWLAAYSFLSSP
VCTLRFVQSTRRLAVGFKCGRVAMLDIGAPSVIFVTNSLSDTGSPIESLCVKSSPVPTDQ
NSISSEALDDLILCAMTKDGQTILFDGNSGKMLASCLKPLKNPTAIRMHIIENCYENSEM
PSEKHEKKSHMINASESHSPAGEHNAVTETKFVDQIFENSLFLMCSEDALRLYSLKSLSQ
GSLESIMEVNLPRTCCWMGTLKKDGRECAVLLLYKTGHIEIRSFPNLEVAGESSLLSLLS
WNFKPNMEKTVCSDDFGHVLLVNGCEVAILSFLAHANGFRLPESLPMLHDKVLAAAADAT
FSHFPVHKKNNDGTPKFLSGIIKGFRSSNEQKVEQVQDFSHLGNIFSSPPYLKPSAIGGD
DEKIIELNIDDIEIDEPTNILPSTGKDKKEKKDKRTDKERLFDGASSDAQPKTRTVDEIK
AKYRKAGETSAIASQAKDKLLERGEKLERISQRTAELQDGAENFASMAHELAKQMEKRKW
WNI
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaagaaacttctgcagaaagcctctggagctgctcagaagcctgctccagct
cctccgccacggggatgtttgatagcagaagacttggatcctcatattgtctcccactac
gggataccttcgacggcgtctcttcttgcttttgaccctattcaatgcctcttggctgtg
ggaacactagatggaaggatcaaagtgattggtggtgataacatcgaggcgattctttca
tctcctaagcagttacctttcaaaaacttagagttcattgagaaccaaggctttctggtc
agcatctcaaatgacaacgagatcgaggtttgggacttggatcttagaaagacagcatca
agcctactttgggagtcgaacattactgcattttcaatccttcatggcactggttacatg
tatgttggtgatgagtacggtatggtgtctgttgtaaagtacaatgctgatgaaggaaaa
ttagtgcagcttccttattatgttccaactgatgctttagctgaagcagcagggctttca
tcacctattgactatcctgttgttggacttctttctcagccttcttcaaggggaactaga
ttgttgattgcattttcaaatggattactttttctttgggatgcatcagaagatcgtgtg
gttttagttcgagggaacaaagatctacctacggagggtaagacagccaatgattctctg
gaagcctcacacgatgagctttctgatcttgaactagatgggaaagagataagttctctg
tgttgggcatcagctgatggttcagttcttggtgttggttatgtggatggagatatatta
ttttgggacttttctgaggggcaaaagggaaagacatctaatcatgctgttaagttacag
ttgtcttcagctgagaaaagacttcctgtcattgttatgcattggtgtttggatgtgact
cgcaagaattgtggtggaaagctctttatctatggtggtgatatcattggctctgatgaa
gtactcacgatgttggctcttgattggtcttctggtttgggaggtctgaaatgtgttggc
cgtgtggacttgacccttagtggttcatttgctgatatggtattgtctccaattgctagt
tcaaggcaaagtggggtgtttttattcctgctgacaaatccaggacaattgcaagcgtat
gatgatacctctctggcctctctgatgtctcaaaaagagaataatagttctgcttctccg
ctgccatatccgatggttgtaccgacgatggatccacggatgacagtagcagtgtttgct
gcattaaatgtgaatgacaagccgtcactggctttatccgagatagtcgtagctgcaaaa
tctcgaacgccacgtactccatctggagaaagtgcacaatggcctctaacaggtggtgtt
ccaagccaccttgatgactacaagcttgagagactgtacatagcaggatatcaagatggg
tctgtgcgaatatgggatgcaacctatccatgtctgtctctcatttacgacttgaagcca
aatgcaaatggtattgacataactggagtagatgcatcagtaacagcaatttccttctgt
cctaagacttcttgtttggctgttggtaacgaaagtggaatggttcgcctattcaagctg
atcggccataaaagtggaggcactttggaagttgttaccaacactgacaaaaaagctcac
catttacatcaagaagatggacctcaatggctggctgcgtactccttcctgagttcccca
gtttgcaccctacgatttgtacagtctacaagaaggcttgctgtgggatttaaatgtggc
agagttgcaatgctcgacattggtgcgccatcagtaattttcgttacaaatagcttatct
gacaccggttccccgatcgagtcactctgtgtaaaatcctcgccagttcctactgatcag
aactccataagctccgaagctcttgatgatttaattttgtgtgcaatgaccaaggatggg
cagaccattcttttcgatggcaatagtgggaaaatgctcgcctcatgcttgaaacctctg
aagaatccaactgcgattcgtatgcacattatagagaactgctatgaaaactctgagatg
cccagcgaaaaacatgagaaaaaatctcatatgatcaatgcaagtgagagtcattcacca
gctggtgaacataacgctgtcacagaaacaaaatttgttgatcagatatttgagaattca
ttatttctcatgtgttctgaggatgcactgcgcttgtattctttaaagtctttatctcag
ggaagtcttgagagcattatggaggtaaatcttccaaggacgtgttgctggatggggacc
ctgaaaaaggatggaagggaatgtgcagtactattgctttacaaaacagggcatattgag
ataagatcgtttccgaatcttgaagttgcaggagagagctctttgctgtcacttcttagt
tggaactttaagcctaacatggagaagacagtatgttcggatgatttcggccatgtctta
ctggtgaatggttgtgaagttgccatcctttcgtttctggcccacgcaaacggattcaga
cttccggagtctttacctatgcttcatgacaaagtccttgcagccgctgctgacgctacc
tttagccatttccctgtccataagaaaaacaacgatggcactcccaaattcctaagtggt
attatcaaaggcttcagatcaagcaatgaacagaaggtggagcaagtacaagatttctcc
cacctggggaacatcttttctagtccaccatacctaaagccttctgctattggtggtgac
gatgagaagattatcgagctaaacatagatgacatcgagatagatgaacctacgaacata
ttaccttcaaccgggaaagacaaaaaggaaaagaaagacaaaagaacagataaggaaaga
ctgttcgacggtgcatccagcgatgcacaacccaaaacaagaacagttgatgaaataaag
gccaagtacagaaaagcaggggaaacctcagcaatagcttcacaagcaaaggacaaactt
cttgagcgcggagaaaaactcgagaggatcagccaacgaacagctgagctccaagacggt
gctgagaactttgcatccatggcacatgaactcgctaaacaaatggagaagcgaaaatgg
tggaacatttga
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