Brassica napus (rape): 106419383
Help
Entry
106419383 CDS
T04128
Name
(RefSeq) pectinesterase PPME1
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106419383
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
106419383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pect-lyase_RHGA_epim
Glyco_trans_1_3
Motif
Other DBs
NCBI-GeneID:
106419383
NCBI-ProteinID:
XP_013715611
UniProt:
A0A817B7D6
LinkDB
All DBs
Position
A10:17880865..17882839
Genome browser
AA seq
365 aa
AA seq
DB search
MGYTNVSILLALVVVFVTPMVLADDATPIPEAKVQVEQWFEANVAPLPARKGLDPALVAA
EAEPRTITVDPKGGEFKTLMDAIKSVPAANTKRVIIKIAPGEYREKVTIDRNKPFITLMG
DPKAMPVITFDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKMKGAQALSMRI
SGNMAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSLYLGTQLHVVGDGI
RVITAHAGKSADEKSGYSFVHCKVTGVGEGIYLGRAWMSHPKVVYAYTEMTSVVNPAGWQ
ENKIAAHDKTVFYGEYKCQGEGSQTEKRVPFTQKIDPTVANRFLTLGYIEGSKWLLPPPA
VSASI
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgggatacacaaacgtgtccatattattagccctggtggtggtgtttgttacaccgatg
gtgttggcagatgatgcaacaccaattccagaggccaaagtccaagtggagcagtggttc
gaagccaacgtcgcgcctttgcctgcgcgtaaaggcttagatcctgctctcgtagcggct
gaggctgagccacgtaccatcaccgtggatccaaaaggaggtgaattcaaaacactaatg
gacgcaataaagagcgttcctgcagcgaacacaaagcgtgtgatcatcaagatagctcct
ggcgaatacagagagaaggtcaccatcgacagaaacaaaccctttattacattgatggga
gatcccaaggccatgccggttattactttcgacggtactgccgccaagtatggaaccgta
gatagtgcctcactcattatattatccgattatttcatggctgtcaacatcgtcgttaag
aatacagcgccggcaccggatggtaaaatgaagggagcacaagctttatctatgagaatc
tcaggaaacatggctgcgttctacaactgtaaattctacggattccaagacacaatctgt
gacgataccggaaaccatttcttcaaggattgttacgtcgaagggacattcgatttcatc
ttcggaagtgggacctctctttacttgggtacgcaattgcacgtggtgggagatggcatt
agagtgataacagcgcatgcgggaaagagcgcagacgagaagagtggatactctttcgtg
cattgcaaggtgactggagttggtgaaggaatctatttgggtagggcatggatgagccac
cctaaggttgtctacgcctacaccgagatgaccagcgtcgtcaacccagccggatggcaa
gaaaacaagatagccgcacatgacaagaccgtgttctatggagagtacaagtgccaagga
gaaggatcacagacagagaagagagttccattcacacaaaagattgaccctactgtagct
aaccgtttccttaccctcggctacattgaaggatccaagtggcttctcccacctcccgct
gtttcggcttcgatatga
DBGET
integrated database retrieval system
