Brassica napus (rape): 106419407
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Entry
106419407 CDS
T04128
Name
(RefSeq) alpha-L-arabinofuranosidase 2-like
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106419407
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
106419407
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GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
zf-CHCC
DUF3805
Motif
Other DBs
NCBI-GeneID:
106419407
NCBI-ProteinID:
XP_013715642
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Position
A10:complement(18662772..18667624)
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AA seq
659 aa
AA seq
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MMDMECSLKFLTSIFLTLFLLGSYSAYENVRLVDAREDNEKHYVTLQVEASNATGRPIPE
TLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSSIWPWSIIGDESTISVVTDRSSC
FERNKIALRMEVLCNSSGCPSEGVGVYNPGYWGMNIEEGKKYKVTLYVRSTGDIDVSVSL
TSSNGSLTLASEQIIALASEVSKWTKKEMLLEANGTDDGARLQLTTTKNGSIWFDQVSAM
PVDTYKGHGFRNDLFQMMVDLKPRFIRFPGGCYVEGDSLSNAFHWKETVGAWEERPGHFG
DVWNYWTDDGLGHFEFFHLAEDLGAAPIWVFNSGISHHDQVETARIMPFVQEALDGIEFA
RGDANSTWGSVRAAMGHPKPFGLKYVAVGNEDCGKKYYKGNYLEFYNAIKKAYPDIKIIS
NCDGSSQPLDHPADYYDFHVYAPAKDLFSMSHKFDNTSRDDPKAFVSEYAAKSETDANKG
NLLAALGEAGFLLGLEKNSDVVGMVSYAPLFVNTNDRRWLPDAIVFNSSHLYGTPSYWVQ
QFFTESSGATLLSSTMEGNSSYVEASAISFQSNGSDYIQIKAVNFANVTVELKVKMTGLD
SSNTKASAKKKKVLTSASVMDENSFSNPEMITPQESLGVMPEGNLTFVLPPYSFSLFDI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatggagtgttctctgaagtttctgacaagtattttcctgacattatttctc
cttggctcttattctgcttacgagaatgttcgtcttgttgatgctcgagaagacaacgaa
aaacattatgtgacactgcaagtagaagcttccaacgccacaggacgacccattcctgaa
accctttttgggatcttctttgaggaaatcaatcatgctggagcaggtggactgtgggct
gaacttgttagcaacagaggatttgaagctggtggacaaatcattccttccagtatctgg
ccatggtccattattggagatgaatcaaccatatctgtagttacagaccgctcttcatgt
tttgagcgcaacaaaattgcacttagaatggaagtgctttgtaacagcagtggttgtcca
tcagaaggagtcggggtttataacccgggttactggggcatgaacattgaagaaggaaag
aaatacaaagtgaccctttatgtgcgttccactggggacatcgatgtgtctgtgtctttg
acaagctcgaatggatcactaactcttgcatcagagcagattatagctttggcttctgag
gtttcaaaatggacaaagaaggaaatgcttttggaggcaaatggaacagatgatggcgca
aggcttcaattgacaactaccaaaaatggttcaatctggtttgatcaagtctcagccatg
cctgtggatacttataagggacatggttttaggaatgatcttttccaaatgatggttgat
ctaaaacctcgtttcatccgtttccctggtggttgttatgtggagggtgattcgttaagc
aacgcattccactggaaagaaaccgtgggagcttgggaagagaggcctggccactttggt
gatgtttggaactactggacagatgatggtcttggtcactttgagttctttcatctggct
gaagatctcggtgcagctccaatatgggtgtttaacagtggaatcagtcatcatgatcaa
gttgaaaccgcacgtatcatgccgtttgttcaagaagcgctagatggtattgagtttgct
cgtggtgatgctaattcaacatggggatcagttcgagctgcaatgggacatccaaagcct
tttggccttaaatatgttgctgttgggaatgaagattgtgggaaaaaatactacaaagga
aactaccttgagttctataatgctatcaagaaagcctatccagacatcaaaatcatctcc
aactgcgatggatcgtctcaaccactcgatcaccccgctgattactatgattttcacgtt
tatgctcctgccaaggatttgttttccatgtcccataagtttgacaatacatcgcgtgat
gatccaaaggctttcgttagtgaatacgctgcgaagagcgaaacagatgctaataaggga
aaccttctagccgctcttggtgaagcaggtttcctccttggtttggaaaagaacagtgat
gttgtaggaatggtaagctatgcacctctcttcgttaacacaaacgacagaaggtggttg
ccagatgctatagttttcaactcgtctcatttgtatggaacaccaagctattgggtccaa
caattcttcacagagtcaagtggagcaactcttctcagctctactatggagggaaactct
tcttatgttgaagcatctgccatatccttccaaagcaatggctctgattacatacagatt
aaggctgttaactttgcaaacgtgacagtggagctgaaggtaaagatgactggattggac
tcgagcaacacgaaagcttctgcaaaaaagaagaaagtacttacatctgccagtgtgatg
gatgagaactccttctccaacccagagatgattacgccacaagaaagcttaggggtaatg
cccgaggggaacttgacttttgttcttcctccctactccttttcattattcgacatttag
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