Brassica napus (rape): 106419412
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Entry
106419412 CDS
T04128
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106419412
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
106419412
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
DUF4044
Motif
Other DBs
NCBI-GeneID:
106419412
NCBI-ProteinID:
XP_013715646
UniProt:
A0A817B843
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Position
A10:18436866..18441227
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AA seq
882 aa
AA seq
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MAGSATTTEFRWKPPPQPQPPTQQQNISDSDSDSGSDSDNNHQQNRHNDLSNSIFKAYLD
CHSSSSPSSLDLSKIQSFLSSSSSGAVSCLICLERIKRTDPTWSCTSSCFAVFHLFCIQN
WARQCLDVHAALAVTRPSTETEPVWNCPKCRSSYLKSKIPSRYLCYCGKEEDPPADNPWI
LPHSCGEVCERGLSNNCGHRCLLLCHPGPCASCPKLVKSKCFCGGVEDVRRCGHKLFSCG
DVCDKVLDCEIHSCREICHDGECPPCRERAVYRCCCGKVEEEKDCCERVFRCEGSCESKL
NCGKHVCERGCHAGECGLCPYQGKRSCPCGKKFYQGLSCDVAAPLCGGTCDKVLGCGYHR
CPERCHRGACLETCRIVVTKSCRCGGTKKQVPCRQDVVCERKCQRMRGCGKHPCRRRCCD
GQCPPCSEICGKKLKCRNHKCQSPCHRGQCAPCPIMVSISCACGHTRFEVPCGTENNQRP
PRCRKLCNITPLCRHGQIQKPHKCHYGACPPCRLPCDEEYPCGHKCKLRCHGPRPPPNRE
FILKPTKKMLNVHVESTPGSPCPRCPELVWRPCVGHHLAAERMMVCSDKTQFACDNLCGN
PLPCGNHYCSFTCHPLEIKSSSLDKRSESCEKCELRCQKERSPKCQHPCPRRCHPEDCPP
CKTLVKRSCHCGAMVHAFECIEYNTLSEQEQSKARSCRGPCHRKLPNCTHLCPEICHPGQ
CPSPEKCGKKVVVRCKCLTLKKEWLCKDVQAAHRATGSDPKDVQKNHFGVGLLPCDSNCK
SKQQMAESVLQQRNVKEIEEKEEPSGKNATKRRKRRERGQDIKETSRLQKLTVAAKKVVM
VVMLIAVLVAVSYYGYKGILWLSDWMNEVEEQRQKSRRYPRI
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggccggatccgccaccaccaccgaattccggtggaaaccaccgccacaacctcagcct
ccgacacaacaacaaaacatatccgattcagattccgattcgggatctgattcagacaac
aaccaccagcagaaccgccacaacgatctatccaactccatcttcaaagcctacctcgat
tgccactcatcctcatctccctcctccctcgacctctccaagatccaatctttcctctcc
tcctcctcctccggcgccgtctcttgcctgatctgcctcgagcggatcaaacgcaccgac
cccacctggtcctgcacctcctcctgcttcgccgtcttccacctcttctgcatccaaaac
tgggctcgccagtgcttagacgtacacgccgcgcttgcagtcacgcgcccttctacagaa
acagaaccggtgtggaactgtccgaaatgtagatcgtcgtatcttaaatcaaagatccca
agtcggtacctttgttactgcggaaaggaggaggatcctcccgctgataacccctggatc
ttgccgcattcttgcggtgaggtctgcgagagagggctgagtaacaactgtggtcaccgc
tgcttgctgttatgtcatcctggtccttgtgcctcttgtcctaagctcgttaaatccaaa
tgcttctgcggcggcgttgaggacgttcgtaggtgtggacacaagctcttctcctgcgga
gacgtttgtgataaggtcttggactgtgagatccatagctgtagagagatttgccacgac
ggcgagtgtccgccgtgcagggaacgtgcggtttatagatgctgttgtgggaaggtggag
gaggagaaggattgctgcgagagggtgtttaggtgcgagggctcgtgtgagagtaagctt
aactgtgggaaacatgtgtgcgagagagggtgtcatgctggagagtgtgggttgtgtcct
tatcaggggaagaggagttgtccctgtgggaagaagttttatcaggggttgtcttgtgat
gtcgcggcgcctttgtgtggtgggacttgtgataaagttcttgggtgtgggtatcatagg
tgtccggagaggtgtcaccgtggtgcgtgccttgagacttgtaggattgtggttactaag
tcttgtagatgtggaggaacgaagaaacaggttccttgccgtcaagatgtggtgtgtgag
aggaaatgccagaggatgagaggttgtgggaagcatccatgtagacgccgttgttgtgat
ggtcaatgtccaccatgctctgagatttgtgggaaaaaactcaaatgcagaaaccataag
tgccagtctccttgtcaccgaggccaatgtgctccttgtccaataatggtgtcgatatca
tgtgcttgtggacatacgcgttttgaggtaccttgtggcactgaaaataatcagagacct
cctagatgccgtaaactatgtaatataaccccattgtgcaggcatggacaaatccaaaag
ccacataaatgccactatggtgcttgtcctccatgtcgactcccttgtgatgaagaatac
ccatgtgggcataaatgcaaactaaggtgtcatggtcctagacctccaccaaaccgagaa
tttatcttaaaaccaacaaagaagatgttgaatgttcatgttgagtctacacctggttct
ccctgccctcgttgtccggagcttgtctggaggccctgtgtaggccaccacctggctgca
gagagaatgatggtttgctctgacaagactcaatttgcatgcgataatctatgcgggaac
ccacttccatgtgggaaccattactgctcgtttacatgtcatcccctggaaataaaaagt
tcatcattggataaaagaagtgagtcctgtgaaaagtgtgaactccgctgtcaaaaggag
agatcacctaaatgccaacatccctgtcctcgacgttgccatccagaagattgtccacct
tgcaaaactctagtaaagagatcatgtcactgtggcgcaatggtccatgcattcgagtgc
attgagtacaatacattgtctgagcaggaacaatcaaaggcccgctcatgccgtggacct
tgtcacagaaaattgccaaactgtactcatctgtgtcctgagatttgtcatcctgggcag
tgtccatctccagagaagtgtgggaaaaaggtggttgttcgttgcaagtgcctaactttg
aagaaagaatggctatgcaaagatgttcaagcagctcatagagccacaggttctgatcct
aaagatgtacaaaagaatcactttggagtcggcctcctcccatgcgattccaactgtaag
agcaagcaacagatggctgaatcggtgttacaacaacgcaatgtcaaagagattgaggag
aaggaggagcctagtgggaaaaatgcaacaaagagaaggaagaggcgtgaacgtggtcag
gacattaaggagacctcaaggctgcagaaacttactgttgccgcaaagaaggtagtgatg
gtggtgatgctaattgctgttctagtagctgtttcatactatggttataagggaatcttg
tggctttcggattggatgaatgaagttgaagaacaaagacaaaagtctagaaggtacccg
cgtatctaa
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