Brassica napus (rape): 106419460
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Entry
106419460 CDS
T04128
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
bna
Brassica napus (rape)
Pathway
bna04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106419460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106419460
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106419460
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
106419460
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106419460
Exosomal proteins of colorectal cancer cells
106419460
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
ATG1-like_MIT1
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
106419460
NCBI-ProteinID:
XP_048598573
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Position
A10:18619395..18621717
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AA seq
443 aa
AA seq
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MASESRIGSDGLFNTAEVTTSGRPVLRRNEVECFLLSSVDLDSEDDPPRFTPLRSGNLIL
TTHRLIWIPSSQSNANTSSLPSSLPLSSITHIFSHKKSIKSMFHSPRIRFQVDSLVVVTV
VFRGKGDFDGFLTKLWECWRGRAWEEDEKSESEASSGSGAGTVAQGLYGNDGTVRMVGLA
GILRKEQEQWESTDKSLQDAFQDLNALMSKAKEMVSLAEKMRQKLLSAPSSQNGGGDDEE
MGSKEEMQQWMLSVGIISPVTKESAGALYHQELSRQLADFVRIPLEQAGGMISLTDMYYH
FNRARGTELISPDDLWQACNLWEKFDVPVMLRKFDSGVKVIQNKSHSDEEVMSRIRTLVT
KTETLRTGVTASDAALTLKIAPAMAKEHLLSAETKGLLCRDMSPDGLRFYFNLFPEIDPT
DLHLVKDIGTYGEWVKATSLLSV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaaagcagaatcggatccgatggtttgtttaacaccgcggaggtaaccaca
agcggcagaccggtgctccgccgcaacgaagtcgagtgtttcctcctctcctccgtcgac
ctagactccgaagacgatcctcctcgattcacccccctgagatccggaaacctaatctta
accactcatcgtctcatatggatcccttcttctcagtcaaacgcaaacacatcatctctt
ccttcttccctccctctctcctccatcactcacatcttctcccacaagaagtcaatcaag
tccatgttccactcccctcggatccggttccaagtggactccctcgtcgtcgtgaccgtc
gtcttcagagggaaaggggatttcgacgggttcttgacgaagctctgggagtgttggaga
gggagagcttgggaggaagatgagaagagcgagagtgaggcttcttcggggtcaggagct
ggaactgttgcgcagggtttatacggcaacgatggaacggtgaggatggtgggattggct
gggatactgaggaaagagcaggagcagtgggagagtactgataagagcttgcaggatgct
tttcaggatttgaatgctcttatgagtaaggctaaggagatggtgagtttggcggagaag
atgcggcagaagctattgtctgctcctagtagtcagaacggaggaggtgatgatgaggag
atggggtctaaagaagagatgcaacaatggatgttgagcgttggtattatctctccagtt
actaaggaatctgctggcgccttgtatcatcaagagttgtctcgccagttggcagatttt
gtgagaatcccattagaacaagctggaggaatgatcagccttactgatatgtattaccac
ttcaatcgtgctaggggaacagagttgatttctccagacgatttgtggcaagcttgtaac
ctctgggagaaatttgatgttccagtaatgctgcggaagtttgatagcggtgtgaaggtc
atccagaacaagtcccatagtgacgaggaggttatgagtagaatcagaacgcttgtgact
aaaaccgaaactttaagaactggagtcactgctagtgatgcagctttgacgcttaaaatc
gctccagccatggccaaggaacatctactatctgcagagaccaaaggtctgctgtgtaga
gacatgagcccagacgggcttagattctacttcaacctgtttccagagattgatccaacc
gatctccatttggtcaaggacattgggacatacggtgaatgggtcaaagcgactagctta
ttgtccgtatga
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