KEGG   Brassica napus (rape): 106419522
Entry
106419522         CDS       T04128                                 
Name
(RefSeq) DNA repair protein RAD5A
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bna03400]
    106419522
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    106419522
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_2 DEAD Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_4 ResIII zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 106419522
NCBI-ProteinID: XP_013715777
UniProt: A0A816VGK7
LinkDB
Position
A3:complement(4435645..4441016)
AA seq 1027 aa
MGTKVSDHLLSTVRSVVGSDYSDMDIIRALHMANLDPTAAINIIFDTPSFSKPNDIAAAA
AAANSTPRGVNGGKRMEDGLKVCPFSEGAANHHRVEEEVDESVSGDECWWFVGCSELSGL
STCKGRRLKAGDELLFTFPSSKALKSEATMPGKRFGRGRPSARNVSDIVRFSTKDSGEIG
RIPNEWAKCLLPLVRDKKVRIEGRCKSAPESLGIMDTILLSVSVYINSSMFQKHSATSLK
VATNTAEESTFHPLPNLLRLLGLTPFKKAEFTPEDLSTRKRPLSSKDPVSTSLLQLNKVK
KLNQDADGDENEHCISDGDLDNIVGVGDSSDLQEMETPRKLLCELRAYQKQALHWMTQLE
KGNCTDEAATMLHPCWEAYCLADKRELVVYLNSFTGDATIHFPSTLQMARGGILADAMGL
GKTVMTISLMLAHSWKAALTGVQCLINEGDKGISSSLDESTSPSVKATKFPGFDKKLLEQ
QSALENGGNLIICPMTLLAQWKSEIEMHAKPGSLSVYLHYGPDRPKDVKLLTQSDVVITT
YGVLTSEFFAENSAKSEGLYAVRWFRIVLDEAHTIKNSKTQVSLAAAALVSDRRWCLTGT
PIQNTLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKS
STDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVQQGKVLHNYASIL
ELLLRLRQCCDHPFLVMSRGDTAQYSDLNKLAKRFLGGKSCGLEKEGKDVLPSVAFVQEV
VEELSKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNSSSGLCPVCRKTVSKQEL
ITAPTESRFQVDVEKNWVESSKITALLEELESFRSSGSKSIIFSQWTAFLDLLQIPLSRN
NISFVRLDGTLNQQQREKVLKEFSEDGSIMVMLMSLKAGGVGINLTAASNAFVMDPWWNP
AVEEQAVMRIHRIGQTKEVKIRRFIIKGTVEERMEAVQARKQRMISGALTDQEVRSARIE
ELKMLFT
NT seq 3084 nt   +upstreamnt  +downstreamnt
atggggacgaaagtttcagaccatctgctctccaccgtcagatcagtcgtgggatccgat
tactcagacatggacataatcagagcccttcacatggcgaatctcgatcccacggctgcc
atcaatataatcttcgacactcccagtttcagcaaacctaacgatatagccgccgccgcc
gccgccgctaattctactccgaggggggttaatggagggaagagaatggaggacggctta
aaggtctgtccttttagtgaaggagcagcgaaccatcatcgcgtggaggaagaagtagat
gagagtgtttcaggggatgagtgttggtggttcgtgggatgttccgagttgtcggggttg
tcgacgtgtaaaggaaggagattgaaggctggtgatgagctgttgtttacgtttccgagt
agtaaagcgttaaagtccgaggctacgatgcctgggaagcgatttggaagggggaggcca
agtgcgcgtaatgtttctgatatcgttaggttctctacgaaggattcaggggagattggt
aggataccaaatgagtgggctaagtgtcttctaccgcttgtgagagacaagaaggttagg
atagaagggagatgcaagtcggctcctgaatcattaggcattatggatacaattcttctt
tcagtaagcgtatacattaatagttccatgtttcaaaagcatagtgctacttcacttaag
gtagccactaatacggcagaggaatcaacattccatcctctcccaaacctcttgcgttta
cttggtttgactccctttaagaaggcagagtttactcctgaggatttgtccactcggaag
cgacctttgagctccaaggatcccgtttctacttcgttgcttcaactaaacaaggtcaag
aagcttaatcaagatgcagacggagatgaaaacgagcactgtatcagcgatggtgatctt
gataacattgttggtgttggggacagttctgatttacaggaaatggaaactccacgtaaa
cttctttgtgagcttcgtgcttatcaaaagcaagcacttcactggatgacccaactggag
aaaggaaattgcactgatgaggcagcaacaatgcttcacccatgttgggaagcgtactgt
ttagctgacaagagggagcttgttgtctacctgaactctttcactggtgatgcaacaata
cactttcctagcacacttcaaatggcaagaggaggaattctagcagacgcaatgggtctc
gggaagactgtaatgaccatatcccttatgcttgcccattcatggaaagctgcattaacc
ggggttcaatgcctcattaatgaaggcgacaaagggatcagcagttctttagatgagtct
actagtccttcagtgaaggcaactaaatttccaggttttgataagaagcttctggaacag
caaagtgcccttgaaaatggtggtaacctcattatatgtccgatgacacttttagcccag
tggaagtcagagattgaaatgcatgctaagcctgggtccctatctgtatatcttcattac
ggccctgacaggccaaaggatgtgaaacttctaacccagagtgatgttgtcatcaccaca
tatggggttctaacatccgagtttttcgcagagaattcagccaagagtgaagggctttat
gcagttcgttggtttaggattgttcttgacgaggcacataccatcaaaaactcaaaaacc
caagtatccttggctgcagcagctttggtttctgatcgacgttggtgtcttacgggtact
cctattcagaatactttggaggatttatatagccttctacgatttttgaggattgaacca
tggggaacttgggcatggtggaataaacttgtccaaaagccatttgaagagggagatgag
agagggctaaagctagtccagtctatcttaaaacctatcatgcttaggagaaccaagtct
agcaccgatcgagaaggacggccgattcttgttctaccacctgctgatgcgcgggtcatt
tactgtgagctctcggagtccgagagagatttctacgatgcgctgtttaaaagatccaag
gtgaaatttgatcaatttgttcaacaagggaaagttcttcataactatgcttcgatcctg
gaattgcttctgcgtcttagacagtgttgtgatcacccttttctagtaatgagtcgaggt
gatacagcgcagtactctgatctgaataagctggctaaacgttttcttggtggaaaatct
tgcggtctagagaaggaaggcaaagatgtactaccatcagtggcttttgttcaggaggtg
gtagaggaactgagcaaaggagagcaaggagagtgtccaatatgcctcgaagcgtttgag
gatgccgttttaacaccgtgtgctcatagattgtgtcgtgagtgtctcttggcgagttgg
agaaactcttcttctgggttatgtcctgtgtgtaggaaaactgtgagcaaacaagaactc
atcacagcaccaaccgaaagtagattccaggtggacgtggagaagaattgggtagaatca
tccaaaatcactgctcttctggaagagcttgaaagttttcgttcttcaggctctaagagc
attatctttagccagtggactgcttttctcgatctcctccaaattcccctctctcggaac
aacatttcatttgtgcgtctggatggtacgctaaaccagcagcaacgagagaaagtcctt
aaagagttttctgaagatggtagtatcatggtaatgttgatgtctctaaaagctggtggg
gtcgggataaatctaacagctgcgtccaatgcttttgtcatggatccatggtggaaccca
gcagtagaggaacaagctgttatgcgtatccatcgtataggacagactaaggaagtcaaa
atcagaagattcatcattaagggaacagttgaggagagaatggaggcggttcaggcgagg
aaacagagaatgatctctggggctttaaccgatcaagaagtacgaagtgcacgtatagag
gaactcaagatgttgtttacctga

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