Brassica napus (rape): 106419762
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Entry
106419762 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106419762
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106419762
04121 Ubiquitin system [BR:
bna04121
]
106419762
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106419762
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106419762
Membrane trafficking [BR:
bna04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
106419762
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106419762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
Motif
Other DBs
NCBI-GeneID:
106419762
NCBI-ProteinID:
XP_048627891
LinkDB
All DBs
Position
A3:complement(4278865..4284339)
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AA seq
870 aa
AA seq
DB search
MSVASTSEESPDSAQRIDSFNGQQSIYFVPFRWWKDAQESVPCESVEKREILYTAATTGS
SYGGPMKLINNIFNSDILFDLRRECDALQSGETGEASVSGRDFALVSSDMWLQALKWHHN
DKINEKGVKSFSAGSVDRGDVYPVQLRLSVLQETNSLAVKICKKDNSVECFRRACKIFSL
DSEQLRIWDISGQTTLFFESDLNNSKDDQQQRDQEMLLELQIYGLSDSIKLKESNKEDGS
TQQTNGITNGTTFRFGRSHSLSFLGKAGEAGTLGLTGLQNLGNTCFMNSSLQCLAHTPKL
VDFFLGEYIREINLENPLGMKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLGRFAPQFS
GFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDEEVADEYWRNHMARNDSII
VDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTSIRTMDLTVMSADGGSLPVSVTV
NVPKFGKFEDLQKALVSACSLSEDETLMVTEVYNNRILRVLEDPTDSLSLIRDGDKLVVY
RLKKDANDSPLIVFMHQKLEEQFICGKSSPTWKGFGIPLVSRLCNVENGFDVENMYRKLL
SSFKMPTEVFTENLESPTEEEATDKAGTDGTTSAEDKNSTDVKETTESVPDPVLRLYLTD
DRGGSIESEILKEKHVNIKSKRLNVLARWPVKELDVYDTCLLSSLPEVSKFETKRPQETV
SLYKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKN
KLEAFVDFPIDGLDLSSYISYKNGQTTYRYMLYAISNHYGGMGGGHYTAYVHQGGDRWYD
FDDSHVNQISQEKIKTSAAYVLFYKRLVEE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggcctcaacgtccgaggaatctcccgattcagctcagcggatcgattcgttc
aacggccagcagagcatctatttcgtccccttcaggtggtggaaagatgctcaagagtca
gtgccttgtgaatcagttgagaaaagagagatcttgtatacagcagcgactactgggtcg
tcttatggaggccctatgaagttgattaacaacatctttaactctgacattttgtttgat
ctgaggagagaatgtgatgcgttacagagtggtgagacgggagaagcaagcgtctcaggc
agggactttgctttggtctcgagtgatatgtggctgcaggcactcaaatggcaccataac
gataaaattaatgagaaaggcgtgaaaagtttctcggctggaagcgttgacagaggtgat
gtttatccagtacaactcaggctctccgtcttgcaggaaaccaattcattggcggttaaa
atttgcaaaaaggacaattcagtggagtgcttcagacgagcatgcaagatattcagtttg
gactcggagcagctgcgtatttgggatatttctgggcaaacaaccttgtttttcgaaagt
gatctgaacaattccaaggatgaccaacaacaaagagatcaagaaatgctcctagagctg
cagatttatgggttatcagactccatcaaactgaaggaatcgaataaagaagatggttcc
acacagcaaaccaacggaattaccaatggcacaactttcagatttggacggagtcattct
ttgagctttttgggaaaagctggagaagccggaactttggggctgacaggcttgcagaat
ctaggaaatacttgtttcatgaacagctcccttcagtgcttggctcatacaccaaagctt
gttgacttctttcttggagagtacatcagagaaataaatctggagaacccattgggaatg
aaaggtgagatcgccttagcttttggtgacttgttaaggagtttgtgggctccaggtgca
tcaacagtggccccaagaacatttaaagcaaaacttggtcgatttgctcctcagtttagt
ggctttaatcagcatgattcgcaggaacttctagctttcttgttggatggacttcacgag
gacttaaaccgtgtaaagaacaagccttatgtggaagcaaaagatggagatggccgtcca
gacgaagaagtggctgatgaatattggcgaaatcatatggctcggaatgattcaataatt
gttgatgtgtgccaaggccagtacaagtcaacattagtttgtcctatttgcaaaaaggtt
tctgttatgtttgatccgttcatgtacctatcgctacctttgccatgcacgtcaattcga
acaatggatttaacagtcatgagtgccgatggaggtagtctgcctgtctcagtgactgtc
aacgttcccaagtttgggaaatttgaagatcttcagaaagctcttgtaagtgcctgctct
ttgtcagaggacgagactttaatggttactgaggtgtacaacaatcggattcttcgtgtc
ctggaggatcctacagattcattgtccttgatcagagatggtgacaaacttgtcgtgtat
cggttaaagaaagatgcaaacgattctcctttgattgtatttatgcatcagaagctggaa
gagcagttcatctgtgggaaatcaagcccaacttggaagggatttggaatccccttggtc
tcgaggctttgtaatgtcgagaatggatttgatgttgagaacatgtaccgtaagttgctt
agttcatttaagatgcctactgaagtcttcacagagaatcttgaaagtcctaccgaagaa
gaagcgacagataaagcaggtacggatggtactacttcagctgaggataaaaattccact
gatgtgaaggagactactgagtctgttccagaccctgtgttgaggctttacctaaccgac
gacagaggaggctcaatagaatctgagatattgaaagaaaagcatgtaaatattaaatcc
aagcggctgaatgtgcttgcacgttggccagtaaaagagctagacgtttatgatacttgt
ctactgagctccttacccgaggtttccaaatttgaaactaagagaccccaggaaaccgtc
tcgctttacaagtgccttgaagcattcttgacggaggagcctctcggtcctgatgacatg
tggtattgtcctggctgtaaagaacaccgacaagccattaaaaaattggatctctggagg
ttgccagagatactggtgattcatctgaagaggttttcttatagccggtttatgaagaac
aagctggaggcctttgtggacttcccgatagatggtcttgatctgtcaagctacatctcc
tacaagaacgggcagacaacttatcggtacatgctctatgcgattagcaatcactatggg
ggcatgggaggtggtcattacactgcatatgtccaccaggggggagatcgatggtatgac
tttgatgatagccatgtcaaccagatcagccaagaaaagatcaagacttcagctgcttac
gttttgttctataaacgtttagttgaagaataa
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