Brassica napus (rape): 106420156
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Entry
106420156 CDS
T04128
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
bna
Brassica napus (rape)
Pathway
bna00906
Carotenoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
106420156
Enzymes [BR:
bna01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
106420156
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
Thi4
GIDA
HI0933_like
GDI
Pyr_redox_2
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
106420156
NCBI-ProteinID:
XP_013716452
UniProt:
A0A816PSJ2
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Position
C8:48621493..48624991
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AA seq
589 aa
AA seq
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MNLCLHNPVTCADRSSSLFSALKTSNNKLGTSKFGFLKNRKKNHVVAVRSVSSTAVEERT
KRESGGGESKVYDAIVIGSGIGGLVAATQLAVKEAKVLVLEKYLIPGGSSGYYERDGYTF
DVGSSVMFGFSDKGKLNLITQALKAVGREMEVIPDPTTVHFHLPNDLSVQVHREYDEFVN
ELISKFPHEKEGILGFYGVCWKIFNSLNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLP
QNAGDIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHYGGINYPVGGVG
GIARSLAGGLVDQGSEILYKANVKSIILDDGKAVGVRLADGREFFAKTIISNATRWDTFG
KLLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWKNLEEPYG
SIFLSIPTILDPSLAPDGRHILHIFTTSSIEDWEGLTPKEYEAKKEEVAAGIIQRLEKKL
FPGLSSSITFKEVGTPRTHRRYLARDKGTYGPMPRGTPKGLLGMPFNTTAIDGLYCVGDS
CFPGQGVIAVAFSGVMCAHRVAADIGLERKSKVLDAGLLGLLGWLRTLA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctgtctccacaatcccgtaacgtgtgctgatcgcagctcctccttgttctcc
gccttgaagacttcaaataacaagttgggtacttcaaagtttgggtttttaaagaatcgg
aagaagaatcatgtggttgcagtgagatctgtttcttccactgctgtagaagaaaggacg
aagagagaaagtggaggaggagagagtaaagtgtacgacgcaatcgtcatcgggtctggg
attggaggattagttgcggcgactcagctagctgttaaagaagctaaagttttagttttg
gagaagtatctgatccctggtgggagctccggttattacgaaagagatggatacacattc
gatgttggctcttctgtcatgtttggtttcagcgataaggggaaactaaacttgataact
caggcgttgaaggcagttggtcgtgagatggaggttatacctgatcccaccactgtccat
ttccatcttcccaatgatctctctgttcaggttcatagagagtatgatgagttcgttaat
gagcttattagcaagtttccgcacgagaaggaagggattcttggattctatggcgtctgc
tggaagatcttcaactcattgaactctttggaactcaagtctcttgaagaacctatctac
ctttttggacagttctttcagaagccgcttgaatgtttgacactcgcttattacttgcct
caaaatgctggggacatagctcggaagtacataaaggatcctcagttactgtctttcatt
gacgcagagtgtttcattgtgagcacagtgaatgctttgcagacgccaatgatcaatgca
agtatggttttatgtgacaggcactatggagggattaactaccctgttggtggtgttggt
gggattgcaaggtctttagcaggaggactagttgatcaaggaagtgaaatactctacaaa
gctaatgtgaaaagcataattcttgatgatggaaaggctgtgggtgtaaggctagcagat
ggaagagaattcttcgctaaaacgataatttctaatgctacaagatgggatacgtttggg
aagctgttgaaaggagaaaagcttccaaaagaagaagaaaacttccagaaagtctacgtg
aaggctccatcgtttctttcaatccacatgggtgttaaagcagaggttctccctccagat
acagattgccatcatttcgtacttgaggatgattggaagaatctggaggagccttatggc
agtatcttcctcagcatcccaaccattcttgatccatccttggctccagatggtcgacat
atactccacatatttacaacttcttccattgaagattgggagggactcactccaaaagag
tatgaggctaaaaaagaagaggtggcagctggaatcatacagaggctagagaaaaaactg
tttcctggtctcagttcatctattacttttaaggaggtgggcacaccaagaacacacaga
cgatatcttgctcgggacaagggaacgtatggaccaatgccaagaggaacaccaaaaggt
ttactgggcatgccgtttaacacaactgctatagatggtttgtactgcgttggggatagt
tgttttcctggtcagggagttatagctgtggctttctcaggagtgatgtgtgctcatcgt
gtagctgctgacattgggcttgagagaaaatcaaaggtacttgatgctggtcttcttggt
ttacttggttggttaaggacactcgcgtag
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