Brassica napus (rape): 106420233
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Entry
106420233 CDS
T04128
Name
(RefSeq) probable galacturonosyltransferase 6 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106420233
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
106420233
Enzymes [BR:
bna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
106420233
Glycosyltransferases [BR:
bna01003
]
Polysaccharide
Structural polysaccharide
106420233
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
106420233
NCBI-ProteinID:
XP_013716543
UniProt:
A0A816PU58
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Position
C8:complement(48626442..48629721)
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AA seq
599 aa
AA seq
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MKQSRRWQRTLLLSLLSISFFAPLILLSNRLQSITPVGRRESIEDLSNFRYKTNDLRLNA
IEHEGGVGLKGPRHILLKDGDFNESGAVIQSNEDEKTVDFPKTDGNDFKFREESQRRTES
SDGKDQLLTVIQLANKTDYKPPLSKFEKSTKAQRDGATDVKIKEIRDKFIQAKAYLNFAP
PGSNSQIVKELRTRMRDLERAVGDVTKDKDLSKGALRRLKPMEAALYKASRIFTNCPAMA
TKLRAMNYNTEELAQAQKNQATYLMHLAARTTPKGQHCLSMRLTSDYFALDPEKRQMPNQ
ENYNDPSLNHYVVFSDNVLASAVVVNSTISSSKDPEKIVFHVVTDSLNYPSISMWFLLNI
PSKATIQIQNIDDMDVLPSDFDQLLMKQNSNDPRFISTLNHARFYLPDIFPGLKKVVLFD
HDVVVQRDLSRLWGIDMKGKVIGAVETCQEGEEASLHSLSTFINFSDAWVAGKFSPKACT
WAFGMNLVDLEEWRRRKLTSTYVKYFNLGTKRPLWKAGSLPIGWLTFYRQTLPLDKRWHV
MGLGRESDIKTVDIEQAAVIHYDGIMKPWLDIGIEKYKRYWNRHVPYYHSYLQQCNIQA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagtcgtcgatggcagaggactctcctcctctccctgctatcgatctctttc
ttcgccccgcttatcctcctctcgaatcggcttcagagcatcactcccgttggtcggaga
gaatcgatcgaagatttatccaactttagatacaagacaaatgaccttagacttaatgct
atcgaacatgaaggtggagtaggcttgaaggggccaaggcacattctcctcaaggatggg
gattttaatgaaagtggtgctgttattcagtccaacgaggatgagaaaacagttgatttc
ccaaaaactgatggaaatgattttaaattcagggaagagtcacaacggaggacagaaagc
tctgatggaaaggatcagttgctaacagttattcaacttgctaataaaacggattacaaa
ccccctttatctaagtttgaaaagagcacaaaggctcagcgtgatggagcaacagatgtg
aagataaaggagatcagagacaaatttatacaagctaaggcctacctgaattttgcccca
cctggaagtaattctcagattgttaaggagttgagaactcgaatgagagatctggaacgg
gctgttggtgacgtgacaaaggataaagatttgtcaaagggcgcccttcgcaggttgaag
cccatggaagctgcactatacaaggctagtcgtatcttcaccaattgccctgccatggct
accaaactccgtgccatgaattacaatacagaagagctagctcaggcgcagaaaaaccaa
gcaacatatctaatgcaccttgctgcaagaaccaccccaaaagggcaacactgtctctcc
atgcgtttgacatcagattactttgccctggatcctgaaaaaagacagatgcctaaccag
gaaaattacaatgatcctagtctcaatcattatgttgtcttctctgacaatgttttggct
tctgcagtcgttgttaactctacaatatcttcttcaaaggatccggaaaaaattgtattc
cacgtggtgactgattcacttaactacccatcaatctccatgtggtttttgctaaacatt
ccaagtaaagctaccatccaaatccaaaacattgatgatatggatgtcctgccttcagat
tttgaccagttgctgatgaagcaaaactccaatgacccaagattcatttctactctcaac
cacgcacgcttctatctcccggatatattcccgggtttgaagaaggtggtactctttgac
catgatgtagtagttcagcgagatttgagtagactgtggggcattgatatgaaagggaag
gtgattggtgctgtagagacttgtcaagaaggtgaagaagcttcactccattcactgagc
acatttattaatttctcagacgcatgggtcgctggaaaattcagtcctaaagcgtgcacg
tgggcgtttgggatgaatctagttgatctcgaagaatggagaagacggaagttgacttct
acatacgtaaaatacttcaacctgggaacaaagagaccgttgtggaaagctggaagctta
ccaatagggtggttgactttctataggcaaacattaccgttggacaagagatggcatgtg
atggggttaggtcgagaatcagacatcaaaacggtcgacatcgaacaagcggcggtaata
cactacgatgggatcatgaagccgtggttggatattggaatagagaaatacaaacgttac
tggaacagacatgtcccttactatcactcctacttgcaacagtgcaatattcaagcttga
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