Brassica napus (rape): 106420461
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Entry
106420461 CDS
T04128
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
bna
Brassica napus (rape)
Pathway
bna04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106420461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106420461
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
106420461
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-rbx1
zf-RING_UBOX
RING_XB3-XBAT31
Prok-RING_4
U-box
zf-ANAPC11
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
106420461
NCBI-ProteinID:
XP_048597346
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Position
A9:complement(37991779..37995023)
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AA seq
372 aa
AA seq
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MVRLRSGGDSSPGPDEPGSSGTHGGIRRFPLAAQPEIMRAAEKDDQYASFIHEACRDAFR
HLFGTRIALAYQKEMKLVGQMLYFVLTTGSGQQTLGEEYCDIIQVAGPYGLSPTPARRAL
FILYQTAVPYIAERISSRAATQAFTFDEDDQSPRMVDLPSSASSVLTRFKDRVQRLWHRA
VRRWPVVLPVAREVLQVLLRANLMLFYFEGLYYHISKRASGVRYVFIGKQLNQRPRYQIL
GVFLLIQLCILAAEGLRRSNLSSITSSVQQASLGSYQTSGGRGLPVLNEEGNLITPEAEK
GNWSPSDATSTTEAVGKCTLCLSSRQHPTATPCGHVFCWSCIMEWCNEKQECPLCRTPNT
HSSLVCLYNSDF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggcttcgcagcgggggcgattcgagcccgggccctgacgaaccaggttcaagt
ggaactcatggtggaatccggcgattcccgctcgcagctcagccggagataatgagagcg
gcagagaaagacgatcaatacgcttctttcatccacgaagcctgccgcgacgccttccga
caccttttcggtacaagaattgctcttgcttaccaaaaagagatgaaacttgttgggcag
atgctttacttcgttctgacgactggttcagggcaacaaactttaggagaggagtattgt
gacattatacaggttgcaggaccttatgggctctctcctacacctgctagacgcgctttg
ttcatactgtatcagactgcagttccctatatcgccgagaggattagctcaagagctgcc
acacaagcgtttacctttgatgaggatgatcagtcaccgagaatggttgatcttccgtct
tcagcttcttctgtattaactaggttcaaagatagagttcagaggttgtggcaccgagct
gttcgaagatggcctgtggttctccctgttgcccgtgaagtcttacaagtgcttctccgt
gccaatttgatgctcttctactttgaaggtctatattatcatatatcgaaacgtgcctct
ggggttcgttatgtattcataggaaagcaattgaatcagagacctagataccaaattctc
ggggttttccttttaatccagttgtgcatccttgctgctgaaggcttgcgtcggagtaat
ttgtcatctatcacaagctcagttcagcaggcatctctaggatcttatcaaacctcagga
gggagagggttgcctgttttaaacgaagagggaaatttgattactccagaagctgagaag
ggaaactggtctccctccgatgcaacttcaactaccgaggcagtaggaaaatgcactctc
tgcttaagcagccgtcagcacccgacggccactccttgtggtcatgtattttgttggagc
tgcattatggaatggtgcaatgagaagcaagaatgcccactttgtcgaacgcccaacacc
cactcaagtttagtttgtttgtacaattctgatttttaa
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