Brassica napus (rape): 106420610
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Entry
106420610 CDS
T04128
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106420610
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106420610
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106420610
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
106420610
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class II (U)
106420610
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106420610
Prokaryotic type
106420610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
tRNA_synthFbeta
PheRS_DBD1
tRNA-synt_2
tRNA-synt_2b
MC4
Raf1_N
Motif
Other DBs
NCBI-GeneID:
106420610
NCBI-ProteinID:
XP_013716922
UniProt:
A0A816JTP1
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Position
C4:complement(47347178..47350495)
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AA seq
490 aa
AA seq
DB search
MAEEAILGFLQNNDEIAHSGYFAAEHNLDHEEVKNVIKSLQAFRYIEAKVLKREFFDLTD
EGKKYAAEGSPEFHFFSAVPEEGTISMDDLQRMLDPFVFDVGSKQAPKKKWVAMGQQVSR
TVQHVEDKVKEMLLQIQQGLELDQETLKSLKYRKLIILTEKWSGYSEVKKGPNYAPKRRS
LATDLTRENLQNWQELDFKEYNVNAKGQPVDSGHLHPLLKVRKQFKDIFCQMGFEEMPTN
NFVESSFWNFDALFQPQQHPARDSHDTFFLKAPSMTRELPEDYVARVKQVHESGGYGSRG
YNCEWKREEANKNLLRTHTTAVSSRMLYALAKGPFTPKKYFSIDRVFRNEAVDKTHLAEF
HQIEGVVCDRGLTLGDLIGVLQEFFSRLGMSNLRFKPAYNPYTEPSMEIFSYHAGLEKWV
EIGNSGMFRPEMLQPMGLPEDVRVIAWGLSLERPTMILYKCDNIRELFGHKVDLKKVKEN
PICRIGIESA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcgattctagggttcctgcagaacaacgatgaaatcgcacattcaggt
tacttcgcggccgagcacaacctcgatcacgaagaagttaaaaacgtcatcaagagctta
caggcttttcgctacatcgaagctaaggtgcttaaacgggaatttttcgatttgactgat
gaagggaagaaatatgcggctgaagggtcgccggagtttcactttttctcggctgttccc
gaggaaggtaccatatccatggatgatctacagagaatgctagatccttttgtattcgat
gttggaagtaaacaagctccaaagaaaaagtgggttgcaatgggacagcaagtctctaga
acggttcaacatgttgaagataaagtgaaggagatgcttttacaaatacagcaaggactg
gaacttgaccaagaaactctcaaatctctcaaatacaggaaactcatcatattgacagag
aaatggagtggctattctgaagtaaagaaaggtcccaactatgctcccaaaaggaggagt
ttggccactgatttgactcgagaaaatctacaaaattggcaagagttagatttcaaggag
tataacgtcaatgctaagggacagcctgttgattctgggcatctccacccccttctaaag
gtgcggaagcagttcaaagacatattttgtcagatggggtttgaagagatgccaacaaac
aactttgttgagagcagcttctggaattttgatgcactgttccaaccgcagcagcaccct
gctcgtgactctcatgacaccttctttctgaaagctccttcgatgacaagggaattacca
gaagattatgttgcaagggtgaaacaagttcatgagtctggtggatatggatcgcgaggg
tataattgtgagtggaaaagagaggaagcaaacaaaaatcttctccgtacccacacaacg
gcggtgtcgtctaggatgctttatgcactcgcaaagggaccattcactccgaagaagtac
ttttcaatagaccgtgtcttcagaaacgaggctgttgacaaaacccatctggcagagttc
catcagattgaaggtgtggtctgtgatcgtggtcttacattgggtgatctcattggtgta
ttacaagaattcttctctcgattagggatgtccaatctacgtttcaagcctgcatacaac
ccatacactgaaccaagcatggagattttcagctaccatgcaggactagagaaatgggta
gagattggaaactctggcatgttcagacctgaaatgctacaaccaatgggtcttccagag
gatgttcgagtcattgcatggggtctctctcttgaaagaccaacaatgatcttatacaaa
tgtgacaacatccgcgagctgtttggacacaaggtggatcttaaaaaagttaaagagaat
cccatctgtcgcattggaatcgaatcagcttga
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