Brassica napus (rape): 106420987
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Entry
106420987 CDS
T04128
Name
(RefSeq) DNA topoisomerase 1 alpha
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106420987
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
106420987
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Topoisomerases
106420987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
CC149
Motif
Other DBs
NCBI-GeneID:
106420987
NCBI-ProteinID:
XP_013717279
LinkDB
All DBs
Position
C2:9702750..9707801
Genome browser
AA seq
978 aa
AA seq
DB search
MDTETVSNPVIGNECVEDSDDDKPIVYKRTSGVVSNSNQSKSTPQRSNAMSPLKSPVTSP
NGTTPSNKTSALTSSKASTAKSPLLNEEDSDDDKPIVFKRTSAASNSKSNTQKSSAVSST
KVLPLKSPVTSPNGTTPLNKTSSSKASPAKPPLRNVTTPSAVKDRSQSQKDQSECKSECE
DSEDERPLSSILSGNSSRSNKGPASSKQVSSPQAEKKNTGGRPLGGADRVIKDESDDEKP
ISSVFQKKTGSSGMSGSKKDVKKPLTKKLHQNGSAVKSEVPDCKVSGKRPLEKNHPVNES
SLKKPKVSASSTSGKMKQESVKTESSADKGRVLVSPTAKRAKPVSTKEDGSDDDDDVPIS
KRLKAESSNSKVSSAKPKAVKGSSSSSAAKTKVTKVVSPPSRSRTVNKNSKKVTKDSKYS
SSSKSSPSSSDGQTKWTTLEHNGVIFPPPYKPHGIKILYKGKPVDLTIEQEEVATMFAVM
KETDYYTKPQFRENFWNDWRKLLGKKHVIQKLDDCDFTPIYEWHLREKEKKKQMSTEEKK
ALKEEKLKLEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIHPSDITMN
IGKGFPVPECPIPGEKWKDVKHDNTVTWLAFWNDPINPKEFKYVFLAASSALKGMSDKEK
YEKARNLTNHIDSIRATYTKNFTSKDVAKKQIAVATYLIDKLALRAGNEKDDDEADTVGC
CTLKVGNVECIPPNQIKFDFLGKDSIRYENTVVVEPLVYKAIGQFQAGKSKEDDLFDELD
TSKLNAHLKELVPGLTAKVFRTYNASFTLDEQLNEKMGAGDVTQKVVVYQQANKKVAIIC
NHQRAVSKSHSAQIEKLDAKLKELQNGLGELRTNLKRAKEGKPPVEGSDGKKPRNLDPNA
WEKKIAQQEVKIEKMKRDMQTKEDLKTVALGTSKINYLDPRITVAWCKRNEVPIEKIFTK
SLLEKFSWAMDAEPSFRF
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggataccgaaactgtttcaaacccggtgataggaaatgagtgtgtagaggacagcgat
gatgataagcctatcgtatacaagaggacaagtggtgttgtttctaattcgaatcagtca
aaatccactcctcagagaagcaatgcaatgtctcctttgaagtctcctgtgacgagccct
aatggaaccactccttccaataaaacttctgcattgacatcttctaaagcttcaacagca
aagtcaccgttgctgaatgaagaggacagcgatgatgacaagcctatcgtgttcaagagg
actagtgctgcttctaattcaaaatccaatactcagaagagcagtgcagtgtcttccacc
aaggtgttgcctttgaagtctcctgtgactagccccaatggaaccactcctttgaataaa
acttcttcttctaaagcttcaccagcaaagccacccttgcggaatgtaactacgccctct
gctgttaaggataggagccagtcacagaaagatcagtctgaatgtaaaagcgagtgtgag
gattctgaggatgagagacctttaagttctatactatctgggaactccagccgctcaaat
aaaggtccagcctcttcgaagcaggtttcttcaccgcaggcagagaaaaagaatactggc
ggtcgacctcttggtggagcagatagagtcataaaagacgagtcagatgatgaaaaacca
atctcgtcagtgttccaaaagaagactggcagtagtgggatgtcaggtagcaaaaaggat
gtaaagaaacctttgacgaaaaagctgcatcagaatggttctgcagttaagagcgaagtg
ccggattgtaaagtctcaggtaagagacctctggagaagaatcatcctgtaaatgaatct
tccttgaagaagcccaaggtctcagcttcaagtacttcagggaaaatgaaacaagaatct
gttaaaacagagagttcagctgataagggaagggttttggtttcacctacagcaaagaga
gcgaaaccagtatctaccaaggaagatggctctgatgatgatgacgatgttccaatatcc
aagagactaaaagcagagtcctccaacagtaaagtgtcttcagcaaagcctaaagcagta
aaaggaagttctagttcatcagctgcaaagacgaaagttacaaaagtagtttctcctccg
tccaggtccaggacagtgaacaaaaactcaaagaaagtaacgaaggattcgaaatattcc
tcgtcttccaaatcttcaccttcctctagtgacgggcaaacgaagtggacgaccttggag
cacaacggtgtaatctttccgcctccatataagccgcacggcatcaagattttgtacaag
gggaagccagtcgacctaacaatcgaacaagaagaggttgcaacaatgtttgcagtgatg
aaagagacggactattacactaaaccgcaatttagggagaatttttggaatgactggcga
aaactgcttgggaagaagcatgtgatacagaagttagatgattgtgacttcactcccata
tatgagtggcatttgagagagaaagagaagaagaaacaaatgagcacagaggagaaaaaa
gctttgaaagaagaaaaactgaagctagaggagaagtatatgtgggctgttgttgatggt
gtcaaagagaaggttggtaatttcagagttgaaccgcctgggctcttcagaggccgtgga
gagcatcccaagatgggaaaattaaagaagcgtatccatccatctgatatcaccatgaat
attggaaaaggttttcctgttccagaatgtccaatccctggtgaaaaatggaaagacgta
aagcatgacaacacagtcacgtggctagctttctggaatgatcccattaacccaaaagaa
ttcaagtatgtgtttttggcagctagcagtgccttgaaagggatgagcgacaaggagaag
tatgagaaagccagaaatctgacgaaccacatagacagtataagagcaacttacaccaag
aatttcacatccaaggatgttgcaaagaagcaaattgccgttgctacttatctcattgat
aaactggcactcagggctggaaatgagaaagatgatgatgaggcagacacagttggttgt
tgtacattaaaggttggaaatgtggaatgtattcctccaaatcagataaagtttgacttt
cttggtaaagattcaatccggtatgagaacacagtcgtggttgagcctcttgtttacaag
gccattggacaattccaggctggaaaatccaaagaggatgatctatttgatgagttagac
acaagcaaattgaatgctcatcttaaagagcttgtacctggtctcacagctaaagtgttt
cgtacatataatgcttcattcacattggatgaacagttgaatgaaaagatgggagctgga
gatgttactcagaaagtagtagtttatcagcaagcaaacaagaaggttgccataatctgt
aatcatcagcgtgctgtttcaaagtcgcacagtgcacaaatcgaaaaactggatgcgaaa
ttaaaagagctccagaatggtcttggagagctcagaaccaatctcaagcgagctaaagag
gggaaaccaccagtggaaggttctgatggaaagaagccaagaaacttagatccaaacgcg
tgggagaagaagatagctcaacaggaagtaaagatagagaagatgaaacgagacatgcaa
acaaaagaggacttgaaaaccgtggcgcttggcacgtctaagataaattacctggatcct
aggataacagtcgcatggtgcaaacgtaatgaagtaccaatcgaaaagatattcaccaag
tctctactggagaagttttcatgggcaatggatgcagaaccaagcttcagattctag
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