Brassica napus (rape): 106421314
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Entry
106421314 CDS
T04128
Name
(RefSeq) protein argonaute 9-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106421314
03036 Chromosome and associated proteins [BR:
bna03036
]
106421314
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106421314
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106421314
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106421314
microRNA pathway
RISC loading complex
106421314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
106421314
NCBI-ProteinID:
XP_013717607
LinkDB
All DBs
Position
C9:complement(53367911..53374715)
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AA seq
906 aa
AA seq
DB search
MDSHEAKRLPPPPPVVPPNLVPEREPIKKTTLLPMARRGIGSEGVRTPLLTNHFRVNFNN
ANGHFYRYSVTITYEDGSPMEAKGVFRKILEKVQETYRTDLGSKYFAYDGQKNLFTIGVL
PSNKMDFLVVLENTPSSRNNTGNASPNETNDADRKRSRLPHRSKKFMVEISYAARIPMQA
IASAIRGKETDNLQDATRVLDVILRQNAARQGCLLVRQSFFHNDARNYINIGGGVFGARG
FHTSFKTTQRGLSLNIDTSTTMVVQPGPVIDFLLANQNVNDPKYLDWNKARRALKNLRVK
VVPSNRECKITGLSEERCKDQMFTMNSKKEMGEVQITVYKYFTEIRGLKLRYSGDFPCIN
VGKPNRPNYIPIEHCELVSLQRYTKSLSSFQKASLVENSRQSPPDRMASLTNSMKKSNYN
ADLVLQESGVSIGSSFIQVEGRVLPAPRLRIGNGEEFQPRNGRWNFNKKKLVEPVTVTRW
VVVNFSAGCDTDRLISDLIRCGKMKGMNVEPPYKVVFQENPNYRGAPANIRVEKMFEQIQ
SELRKEGKPKFILCVLAEKKNSLVYGPWKKKNLIEHGIVTQCIAPPKNVRDQYITNVLLK
INAKLGGLNSLLAMERSRAMMPLVTQVPTFIVGIDVSHGSPNQSDIPSIAAVVGSREWPL
ISKYRACVRTQSRKTEMIDNLFKLVPNEKGKLVDEGIFWELLFDFYISSGKRRPEHIIIF
RDGVSDSQFNQVLNIELDQMMQACKFVEENWEPKFTVIIAQKNHHTKFFQDRGTENVLPG
TIVDSRICHPHNNDFYLCAHAGLIGTTRPTHYHVLYDEIRFSTDDLQELVHSLSYVYQRS
TTAISVVAPICYAHLAAAQMGTVMKFEDMSLSERSSIHDGITRSGEAPVPPMPMLNSYVA
SSMFFC
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggattctcatgaagcaaaacggctaccacctcccccaccggtagttccaccaaacctt
gtgcctgaacgagagcctatcaaaaagaccacccttcttccaatggctcggcgtggcatc
gggtccgaaggagtgaggacacctcttcttaccaatcacttcagagtcaacttcaacaac
gcaaatggccacttctatcgttacagtgttactattacatatgaagatgggagtccaatg
gaggctaaaggtgtttttaggaagattcttgaaaaggttcaggaaacgtatcgaacagat
ttaggatccaaatactttgcttatgatggccagaagaatctgttcaccattggtgttctt
cctagcaacaaaatggatttcttagtcgttcttgaaaacacaccttctagcagaaacaac
actggaaatgctagcccaaatgaaacaaatgatgcggacaggaaaagatcaaggctgcca
caccgatccaagaagttcatggttgagataagctatgctgcaaggatccccatgcaagct
attgcaagcgctattcgaggaaaggaaacagataatcttcaagatgctacaagagtgttg
gatgtcattttgcgtcagaatgcagctaggcaaggttgcctacttgttcgccaatcattt
tttcataacgatgctcggaactatataaacattggcggaggtgtatttggtgctagaggg
ttccacacaagcttcaaaactactcaaagaggcttatccttgaacatcgacacttcaact
acaatggtagtacaaccaggccctgttattgattttcttcttgcaaatcagaatgtgaat
gacccaaagtatcttgactggaataaggctaggcgtgctctcaaaaatcttagagttaag
gttgtcccctcaaatagagaatgcaagataactggactaagtgaagaacgctgcaaagat
caaatgtttactatgaattctaaaaaagagatgggggaagttcagattaccgtgtacaag
tacttcaccgagattcgcggtctcaaactgcgatattcaggtgactttccttgcatcaat
gttggtaagccaaatcgcccaaattacatccccattgagcactgtgaacttgtgagtcta
cagcgttacaccaaatcgcttagtagttttcagaaggcttctctggtagaaaattctagg
cagagtccacctgacagaatggcttcactaaccaatagtatgaagaagagcaattataac
gctgaccttgtgttgcaagaaagtggtgtcagcattggctctagcttcatccaagtggag
ggtcgcgttttaccagcaccaaggctgagaataggcaatggagaggagtttcaacctcgc
aatgggcgttggaacttcaataaaaagaaacttgttgagccagtcacggttactagatgg
gttgttgtgaacttctctgctggatgtgatacagataggctaatttctgacttgattaga
tgtggaaagatgaaaggaatgaatgtagaacctccatacaaagtcgtatttcaagaaaat
cctaactataggggtgcaccagccaatatcagagtagaaaagatgtttgagcagatccaa
tctgaactcagaaaagaaggaaagccaaaattcattctttgcgttctcgcagaaaagaaa
aactctcttgtttatgggccttggaagaagaagaatcttattgaacatggaattgttact
cagtgtattgctcctccaaaaaacgtaagagatcagtatatcaccaatgttcttctcaag
ataaatgccaagcttggtggactgaactccctgttagctatggaacgctcacgagcaatg
atgcctttagtaacgcaagttcctactttcattgttgggatagatgtatcccatggttcc
cctaaccagtctgacataccatcaattgctgcggttgtgggctccagagaatggccactc
atctcgaaatatagggcatgtgtgcgcacacaatctcggaaaacggaaatgattgataat
ctcttcaaacttgtccccaacgaaaagggaaaactagtagatgaaggaattttctgggag
ctcttgttcgacttttacataagctcggggaagaggagacctgaacacattatcattttc
agggatggtgtaagtgattcacagttcaatcaagttctcaacattgaattggatcaaatg
atgcaggcatgcaagtttgttgaagaaaattgggaaccaaagttcacagtgatcattgcc
cagaagaaccatcacaccaagttcttccaggatagaggcactgaaaatgttcttccagga
acaatagttgacagcaggatctgtcacccacacaacaatgacttctatctctgtgcccat
gctggattgatcggaactaccaggccaacgcattaccatgtgctttatgatgagattaga
ttttcgacagatgacctccaagaacttgtgcattctctatcatatgtctaccagaggagc
accactgccatctctgtcgttgcacctatttgttatgctcatttggcggctgcacagatg
ggaactgtgatgaaatttgaggatatgtctctgtctgagagatcatcgatccatgatggg
atcacgagatctggagaagcccctgtgccacccatgccaatgttgaactcgtatgttgca
agctccatgttcttctgctaa
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