KEGG   Brassica napus (rape): 106421479
Entry
106421479         CDS       T04128                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
bna  Brassica napus (rape)
Pathway
bna04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:bna00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    106421479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106421479
   03029 Mitochondrial biogenesis [BR:bna03029]
    106421479
Membrane trafficking [BR:bna04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    106421479
 Others
  Specific organelles associated proteins
   Auto phagosome
    106421479
Mitochondrial biogenesis [BR:bna03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    106421479
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40 EIF3I WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_WDR75_1st ANAPC4_WD40 ATG16 Beta-prop_VPS8 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_IFT122_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_DCAF4 Ge1_WD40 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_EIPR1 WDR54 Beta-prop_SPT8 Beta-prop_WDR19_1st PQQ_2 Beta-prop_NUP159_NUP214 eIF2A Cytochrom_D1 Beta-prop_IP5PC_F Beta-prop_RIG_1st WD_LRWD1 INO80E Peroxidase_2
Other DBs
NCBI-GeneID: 106421479
NCBI-ProteinID: XP_013717772
LinkDB
Position
C9:complement(36178782..36181496)
AA seq 509 aa
MSQEEKAMEAIKDALRALRKRHLLEEGAHGPAISALSKPMISQGSEWKEKTEKLEIELQQ
CYKAQSRLSALLVIEVAESRTSKASLQDKELLINDLEKDLSQTREECTRLQEELEEKTKT
LDLLITENKEVRSQLEEMTNRAQKAESENKMLIDRWMLQKMQDAERLNEANALYEEMLAK
LKANGLENLARQQVDGIVRRNEDGTDHFVESTIPSTCGHRIHAHEGGCGSILFQYNSRTL
FTGGQAGPVKMWDTNSGSLIKSLNGSLGNILDLAITHDNKSLIAASSSNNLFVWDVNSGR
VRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLQKGYCTNTVLFTSNCNAICLS
IDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAITSVSLSRNGNMILTSGRDNVHNVF
DTRTLEICGTLRASGNRLASNWSRSCISPDDEYVAAGSADGTVHVWSISKGSIVSTLKEQ
TSPILCCSWSGIGKPLASADKNGYVCTWT
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcacaggaggagaaagcaatggaagccataaaagacgctttgagagctttgcggaag
cgccatcttctggaagaaggagctcatggacccgccatttctgcgctctctaaacctatg
atttctcagggatctgaatggaaggagaaaacagaaaagctggagatagagctacagcag
tgttacaaagcgcaatcccgattgtctgcgctactcgtgatagaagtagctgaatccaga
acttcaaaggcttctttacaagacaaggagttgttgattaatgacctcgagaaggactta
tcccaaacaagggaggagtgtacacgattacaagaagagttagaggaaaagaccaagacg
cttgatttacttattaccgaaaacaaggaagtcagatctcagctggaggagatgactaac
agagctcaaaaagcagagtctgagaacaaaatgttaattgatcggtggatgttacagaag
atgcaggatgcagaacgtcttaatgaggcaaatgctctctatgaagaaatgctagctaag
cttaaggccaatggtttggaaaatcttgctaggcagcaagttgatggaattgtccgacgc
aatgaagatggaactgatcattttgttgagtctaccatcccgtcaacatgtggccaccgt
atccatgctcacgaaggtggctgtggttcgatactctttcaatacaactctcgtactctg
tttaccggtggccaagccggaccagtaaaaatgtgggacaccaatagtgggtctctaatc
aaaagcttaaacggttcccttgggaatatacttgatctagccataacccacgacaataag
tccctgatcgcagcaagcagctctaacaatttgtttgtgtgggacgttaactctggtagg
gtacgtcatactctcacaggccacacagataaagtatgtgctgtggatgtgagcaagttc
tccagccgacatgttgtcagtgcagcttatgaccgtactattaaactctgggatttgcag
aaaggttactgtacaaacacagtgctctttaccagtaactgcaatgcgatctgcttaagc
atagatgggcttacggtattctcaggccacatggatgggaatctgaggttgtgggatatt
caaactgggaaacttctgtctgaagtagctggacattcttctgctataacctctgtatca
ttgtcccggaatggaaatatgatcttgacgagcgggagagacaacgtgcataatgtattc
gatacacggactttggaaatttgcgggacgttgagagcatcagggaacagattggcatcg
aattggagccggtcgtgtataagtccagatgatgaatacgtggctgcgggatctgctgat
ggaacggtgcatgtctggtctatctccaaaggcagtatagtgagcactctcaaggagcaa
acatctcctatactgtgttgttcttggagtgggattgggaaaccattggcatcggctgat
aaaaacgggtatgtctgtacttggacatga

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